Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03284 ATGGGTTGCTTCTCCTGTTTCGCTCCGAGTTCCACTTCCAAGGAGGATCACAACCACCGTCACCACCACCACCGACAACCCAATCCCAATCCCAACCCCAACCCCAATCCCAATCCATCTCTCCCTTCTCAGATTTCCAAATTGCCCTCTGGAGCAGACAAATTACGGTCCAGAAGTAATGGAGGTTCCAAAAGGGAATTGCCTCCTCCCAACACAAAGGAAGGACATGGAGCCGCCGGCCAAATCGCTGCTCAAACTTTTACTTTCCGTGAACTTGCAACTGCAACCAAAAACTTTAGGCCGGACTCCTTTGTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGCAGGCTTGAAACCACTGGTCAGATTGTTGCAGTCAAACAGTTAGACAAAAATGGTCTACAGGGTAATCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTGCATCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGGGAACAACGCCTCCTTGTTTATGAATTTATGGCTTTGGGATCATTGGAAGATCACCTTCATGATCTCCCCCCTGATAAGGAACCACTAGATTGGAACACTAGAATGAAAATAGCTGCCGGTGCAGCAAAAGGATTAGAATACTTGCATGACAAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAGTCGTCTAACATATTACTTGATGAAGGATACCACCCTAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCTACCCGAGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAGCTGACAGTGAAGTCTGATGTATACAGCTTTGGGGTTGTCTTCTTAGAGCTTATTACTGGCCGCAAAGCAATTGACAGCACCCAGCCCCATGGAGAACAGAATCTTGTCACATGGGCACGTCCACTTTTTAACGACCGCCGGAAGTTTTCAAAGTTGGCTGATCCTAGGCTTGAGGGACGGTTTCCCATGCGGGGTCTTTACCAGGCTCTGGCTGTGGCATCAATGTGCATTCAAGAATCTGCTGCCACACGCCCTCTGATTGGAGATGTGGTGACGGCCCTCTCTTATCTGGCCAACCAGGGATTCGACCCCAACAGTGCTGGGCATGGTTATAGGGGGTCTAGCGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATACTGAAAAATGATGAAGCTGGGGGATCAGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCAAGAATGTTAAACAGAGATCTAGATAGAGAACGTGCTGTGGCTGAAGCCAAGCTATGGGGAGAGAACTTGAGACAAAAAAGACAACAAAGTTTGCAGGAGGGCACTTATGGTTCTAAGTAG 1425 0.4779 MGCFSCFAPSSTSKEDHNHRHHHHRQPNPNPNPNPNPNPSLPSQISKLPSGADKLRSRSNGGSKRELPPPNTKEGHGAAGQIAAQTFTFRELATATKNFRPDSFVGEGGFGRVYKGRLETTGQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGEQRLLVYEFMALGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQGFDPNSAGHGYRGSSDDKRNRDDKGGRILKNDEAGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKLWGENLRQKRQQSLQEGTYGSK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03284 474 ProSiteProfiles Protein kinase domain profile. 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03284 474 CDD STKc_IRAK 105 373 - -
Phco3g03284 474 MobiDBLite consensus disorder prediction 384 442 - -
Phco3g03284 474 MobiDBLite consensus disorder prediction 28 42 - -
Phco3g03284 474 Gene3D Transferase(Phosphotransferase) domain 1 176 386 - -
Phco3g03284 474 MobiDBLite consensus disorder prediction 1 79 - -
Phco3g03284 474 Pfam Protein kinase domain 103 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03284 474 MobiDBLite consensus disorder prediction 391 442 - -
Phco3g03284 474 PANTHER OS07G0668900 PROTEIN 3 385 - -
Phco3g03284 474 SUPERFAMILY Protein kinase-like (PK-like) 85 371 IPR011009 -
Phco3g03284 474 Gene3D Phosphorylase Kinase; domain 1 83 175 - -
Phco3g03284 474 FunFam Serine/threonine-protein kinase PBS1 176 389 - -
Phco3g03284 474 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Phco3g03284 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Phco3g03284 474 FunFam Serine/threonine-protein kinase PBS1 72 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03284 Phco-Chr3 58511319 58515893 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco3g03284 Pkinase 1.8e-45 CL0016