LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco3g03234	ATGCGGATGAGCTGCAATGGGTGTCGAGTTCTGAGAAAAGGTTGCAGTGAGAATTGCAGCATCAGACCCTGTTTACAGTGGATCAAAAGCCCAGAATCTCAAGCCAATGCTACTGTGTTTCTCGCTAAGTTCTATGGCCGTGCTGGCCTCATGAATCTCGTCAACGCAGGCCCCGAACATCTTCGTCCAGCGATCTTTCGTTCGTTGTTGTACGAGGCATGCGGTCGGATAGTGAACCCGATTTACGGTTCAGTTGGGTTGTTGTGGTCGGGGAGCTGGCAGCTGTGTCAAGCCGCAGTTGAAAACGTCTTGAAAGGCGCGCCGATTACGCCGATCACGTCTGAAGCGGCGGCGAGCGGGCGGGGCCCACCGCTCAAGGCGTACGACATACGCCACGTGTCGAAAGATGAGAACTCCGCCGCGTCGAACGAAACTCAGCAGCAACGAGTCAAGACTCGGTCTCGCGTCAGGCGTCCCCTCGCCAACTCCAAGCCCAAATCCACCACCAACGAAAACAACGGTAACAAGGGAACCGAATTGGGTCTTTCTGAACCGGGTTTGATGACATGCGAGTGGACCGAAGAGGTGTTGAATCGATCTGGCAGTCACGATTCGTCGCTGAGCCACCAGTCTGAGGCGGCGAATGCGGTGGAGAGCGAGAGCATGGTGTCGGTGGAGACGGCGGAGACTTCGATCCTCTTCCGAGATGAACCGGAGTCAAACCCGAAGATCGTGAAACGAACCGATGATGTTGGTTTGGAGCTTACGCTGGGGTTCGAACCGGTATCACGTGCGCAGCACGTGGTTCCGGTGAAGAAGAGAAGGATCGAGTTGAAGGATTTTAGTGGTTCGGCTGAGAGTGAGTCGTGCAAGATGGAGCTGGGGCTTGAATGTTCGGCTTGA	903	0.5526	MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVENVLKGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAASNETQQQRVKTRSRVRRPLANSKPKSTTNENNGNKGTELGLSEPGLMTCEWTEEVLNRSGSHDSSLSHQSEAANAVESESMVSVETAETSILFRDEPESNPKIVKRTDDVGLELTLGFEPVSRAQHVVPVKKRRIELKDFSGSAESESCKMELGLECSA	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco3g03234	300	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 38	3	257	-	-
	Phco3g03234	300	Pfam	Lateral organ boundaries (LOB) domain	4	102	IPR004883	-
	Phco3g03234	300	ProSiteProfiles	LOB domain profile.	3	109	IPR004883	-
	Phco3g03234	300	MobiDBLite	consensus disorder prediction	135	185	-	-
	Phco3g03234	300	PIRSF	AS2	1	300	IPR017414	-
	Phco3g03234	300	MobiDBLite	consensus disorder prediction	161	179	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco3g03234	Phco-Chr3	58096152	58097210	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Phco3g03234		LOB	2.3e-24	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco3g03234	3	58096152	58097210	Phco3g03234	3	58096152	58097210	ECH