Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03189 ATGGCTGAAGTTGAATACCTTGCAAAATCCACTACCCTGAAGCTCTTTGGCATCAACATTAACAAGTCCCCAGAAAACCAAACGCACCATGAAGCAGCTTCAGATTCTGAGTCTTTCATGGCAAGAAAATACGAGTGTCAGTACTGCTTCAGAGAATTCGCAAACTCACAGGCCCTAGGAGGGCACCAAAACGCGCACAAGAAAGAGAGACAGCTCTTGAAACGTGCTCAAATGCAAGCCGCTCGCGGCTTTGTCGCTTCACACGTTCACAACACCATCCTATCAACCTTCTCACCACAATCTCAGCCACCTTTACCGTGGCTGTGCACACCACATGCATGGTCAAGTGGTGCTGCATGTGACTCGGGAGTCGCTTTTGTGACTCCTGGAAGACGAGTCTATGCCACAGCCGGTGCCTCCATCACTGATGGCCGCCGCCACCGCAATACTCCGCCAGAGATCGGTGGCTTCAACAGCGGCAATGGCAGAGGGAACGGTGGTGGTAATGGTGGTGAACGAGGGTTCGGTTTGGATTTGCATCTTAGCCTATGA 552 0.5163 MAEVEYLAKSTTLKLFGININKSPENQTHHEAASDSESFMARKYECQYCFREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHVHNTILSTFSPQSQPPLPWLCTPHAWSSGAACDSGVAFVTPGRRVYATAGASITDGRRHRNTPPEIGGFNSGNGRGNGGGNGGERGFGLDLHLSL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03189 183 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Phco3g03189 183 PANTHER ZINC FINGER PROTEIN 5 9 183 IPR044299 GO:0010090
Phco3g03189 183 MobiDBLite consensus disorder prediction 142 183 - -
Phco3g03189 183 SUPERFAMILY beta-beta-alpha zinc fingers 42 71 IPR036236 -
Phco3g03189 183 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Phco3g03189 183 Gene3D Classic Zinc Finger 21 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03189 Phco-Chr3 57620735 57621286 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco3g03189 None None None