Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03184 ATGTTGTCCCTGTCGTCGACCACCACCACCACCACCACCACCACCACCATTGTAGCCATCACCCTCATCTTCTCTCTCCACCACACGACATCGTTGCCGCCCCATGCACCACTCTCCACCTGCCTCGTCACCTCCTTCAACTGCGGCACCATAACCAACCTTTCCTACCCTTTCACCGGCGGCGACCGCCCCTCCTTCTGTGGGCCACCACAGTTCCATTTGAACTGCCAAAACGGTGTCGTCCCCGAGTTGAACATCTCATCAGTGAGCTACCGAGTCATTAGTATCGACCCGGTGGCTCAAACTCTCACCTTAGCGAGATTAGACCTTTGGAACGAGACATGCACCCATCTGTACGTGAACTCAACTTTTGATGACCCCATCTTCAGCTACGGTTCGGGAAACCAAAACCTGACCTTGTTTTATGAATGCAAACCCACTTCAGCGTTCACCAAAACACCAGAAAATTTGTTTCACTGTGATAGTAAAGGGGCTTTGAATGAGTCTTATGCTTTGGTTGGTTCTTTACCTTCGGATCCTATTCTTGGGATCGTTGAATGCGTAGAACATATTGCAGTGCCAATTCTTAAAGAGCAGGCTGATAGGCTGGTTGAAAACCGGTCATTGCTTGGGGAGATTCTGATGAGGGGGTTTAATGTGAACTATTGGAATCCTTATGACAGTGTGTGCCTTGAGTGTGTTGGTTCTGGTGGCCACTGTGGCTTTGATTCTGATAACAACCAACCTATTTGTATTTGTGAGGATCAATTGTGTTCAACTCCAGGTAAACGCAACAATGTAGGTTTAGTAATAGGCGTTAGTGTAGGAGGAGTTGCAGTCCTTGTTGTCATTCTTGGATGTGTGTACTTTATGGTACAAAGAAGAAGAAAAATTTATAATAAATCAAGAAGTATGGAGCTCTTCATAGCTCCAACTTCAAGCGGAGACACTTTTGCATCTACCACTAATACGTCTCAGAGTCTATCTTCTTACCAATCTTCCAAGTCTGATCCAGTAGCCAGGAGTTACTACTTTGGTGTCCAGGTCTTCACCTATGAGGAACTGGAGGAATCTACCAAAAACTTTGATGCTTCTAGAGAACTTGGCGAGGGAGGTTTTGGCACTGTTTACAAAGGTAAACTCAAAGATGGACGTATAGTTGCAGTGAAACGCCATTATGAAATAAACTCTAGGCGTATTACGCAGTTCGTGAATGAAGTTCAGATTCTAGCCCGCTTAAGGCACAAGAACCTTGTGACACTCTTTGGATGCACCTCTAAACATAGCAGAGAACTTCTCCTTGTTTATGAATTCATACCTAATGGAACAGTATCTTATCATCTTCAAGGAAGAAGCTCAAAATCAACTTTACTCCCTTGGCCTATAAGATTGAACATTGCTCTTGAAACAGCTGAGGCTCTAGCCTACCTACATGCAAATGATGTCGTACACCGCGATGTTAAAACCAACAACCTTCTCCTGGATGATCAATTTCTCGTCAAGGTTGCTGATTTTGGTCTCTCAAAGGAATTCCCAAATGATTTCGTAACTCATGTGTCAACAGTTCCACAGGGAACACCTGGTTATGTTGACCCTGAGTATTATCAGTGCTACCAACTCACTTATAAAAGTGATGTTTACAGCTTTGGAGTGGTTTTGGTTGAGCTCATATCATCCTTGCAAGCTGTGGACATCAACAGGAATCGCACTGATGTGAATTTGTCAAACATGGCTGTCAATAGAATTCAAAACCAGGAACTGCATGAGTTGGTTGATCCTTGTCTTGGGTTTGAGAAGGATGATGCTACAAGGAGGATGATAACAGCAGTGGCAGAATTGGCCTTTAGGTGTTTGCAACAGGAAAGAGATATGAGACCATCCATGAATGAGGTGGTGGAGATCTTAAGAGGAATCAAGAGAGATGGGGTTGGTGCACGGGAAGAGACAGAAATATTGGATATTAGGACTGATGAAGTTATACTTTTGAAGAAGGCTCATTCCCCGGTTTCACCAGATTCAGTTGTTGACAATTGGGTTAGCGGCTCCTCTAATTTGGGTGAAGAAAAAAAGGCAGCTTTTATATTCCCCGATAAAGCCCTCTTCCCTTCCCTTTCTCAGTCCAATCAATCTCTCTCTTCATCTTCTCTCAGATCTCACTCTCTCTTTCTCTCTCCTCACTTCTCAATGCACAAATTCAAGTTTCTCGCCACCCAATGCGCCGTCGCCGGCAGCCCCACCCGCAGTCCAACAACCAGCCCTGTCATACACCTGCGCCGCCGCAAGACCCTCCGCATGTTCCTCGCCCGACGCCGCTTCCACGCCCCACCGCAAGATCCCCCACCCCTCCCCGAGTCCCGCGTCCGCCACAAGCTCAAGGACCTCTTCGTCTCCTCACCGCCGCCACCCCTTAACGAAGACAGAACAATCTTCCATCATCAACAACAACAACAACAGCAGCAACGAAAAGAAGAAGAAAAAGAAGATCAGCCCAACGAACTCATCCTCCGCGCCGGATCTCCCTTCCGGCGCTCCGCCGCTGCTCTCCGCCCGGTATCCTCCGTCTTCCGCTACCGGTTGCTGAAAAGAGCGTGGCGGCCGGTGCTTGTCACCATCCCTGAATAG 2622 0.4706 MLSLSSTTTTTTTTTTIVAITLIFSLHHTTSLPPHAPLSTCLVTSFNCGTITNLSYPFTGGDRPSFCGPPQFHLNCQNGVVPELNISSVSYRVISIDPVAQTLTLARLDLWNETCTHLYVNSTFDDPIFSYGSGNQNLTLFYECKPTSAFTKTPENLFHCDSKGALNESYALVGSLPSDPILGIVECVEHIAVPILKEQADRLVENRSLLGEILMRGFNVNYWNPYDSVCLECVGSGGHCGFDSDNNQPICICEDQLCSTPGKRNNVGLVIGVSVGGVAVLVVILGCVYFMVQRRRKIYNKSRSMELFIAPTSSGDTFASTTNTSQSLSSYQSSKSDPVARSYYFGVQVFTYEELEESTKNFDASRELGEGGFGTVYKGKLKDGRIVAVKRHYEINSRRITQFVNEVQILARLRHKNLVTLFGCTSKHSRELLLVYEFIPNGTVSYHLQGRSSKSTLLPWPIRLNIALETAEALAYLHANDVVHRDVKTNNLLLDDQFLVKVADFGLSKEFPNDFVTHVSTVPQGTPGYVDPEYYQCYQLTYKSDVYSFGVVLVELISSLQAVDINRNRTDVNLSNMAVNRIQNQELHELVDPCLGFEKDDATRRMITAVAELAFRCLQQERDMRPSMNEVVEILRGIKRDGVGAREETEILDIRTDEVILLKKAHSPVSPDSVVDNWVSGSSNLGEEKKAAFIFPDKALFPSLSQSNQSLSSSSLRSHSLFLSPHFSMHKFKFLATQCAVAGSPTRSPTTSPVIHLRRRKTLRMFLARRRFHAPPQDPPPLPESRVRHKLKDLFVSSPPPPLNEDRTIFHHQQQQQQQQRKEEEKEDQPNELILRAGSPFRRSAAALRPVSSVFRYRLLKRAWRPVLVTIPE 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03184 873 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03184 873 MobiDBLite consensus disorder prediction 811 838 - -
Phco3g03184 873 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Phco3g03184 873 MobiDBLite consensus disorder prediction 817 832 - -
Phco3g03184 873 Gene3D Phosphorylase Kinase; domain 1 333 438 - -
Phco3g03184 873 SUPERFAMILY Protein kinase-like (PK-like) 338 638 IPR011009 -
Phco3g03184 873 SMART serkin_6 362 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03184 873 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 338 438 - -
Phco3g03184 873 Pfam Protein kinase domain 364 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03184 873 Pfam Wall-associated receptor kinase C-terminal 183 256 IPR032872 -
Phco3g03184 873 Gene3D Transferase(Phosphotransferase) domain 1 439 646 - -
Phco3g03184 873 FunFam Wall-associated receptor kinase-like 20 439 648 - -
Phco3g03184 873 Pfam Wall-associated receptor kinase galacturonan-binding 47 106 IPR025287 GO:0030247
Phco3g03184 873 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 682 IPR044652 GO:0004672
Phco3g03184 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03184 Phco-Chr3 57582785 57588911 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco3g03184 Pkinase 4.4e-47 CL0016