Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03134 ATGGTCTTCCCGTCCCTTCCAATCTACCTAGATCCACCCAACTGGTCACAACAGCAACCTAATCAGCCAGCAGGAATTGGCAACCAGAATCCACACACTCCACCACCTTTGCAGCCGCCACCTTCATCGGTGACGGCTGTTATTGGAGGTGGTGGTGGCGGCTACCAAGGCTCAATTAGACCAGGATCAATGGCTGATAGGGCAAGGATGGCAAAGATACACCAACCTGATGCAGCACTCAAATGTCCACGATGTGAATCTGCCAACACCAAGTTTTGCTACTACAACAACTATAGCCTTTCTCAGCCTCGCCACTATTGCAAGACTTGCCGGCGTTACTGGACCAGAGGCGGTGCACTCAGAAACGTGCCAGTTGGAGGTGGATGTAGAAGGAACAAAAGAAACAAAGGAAGTAGCGGTAGATCGAAGTCTCCTATGAAACCCTCAACAGGCTCTACCTCTGCAAGTGCTAATTCTTCTTCTAGCGGCTGCACCACTGATCATGTGATGATGGCTCACTTGCCAACTCCAACACAAACTCAGTTTCCATTCTTGACCTCTTTACATCATTATAATAGTGACTACGTTTCTGGGGGCATTGGATCTCATTTTGGGGCGATCACAACACCTTTGGTGGCTAGAAATGACAGTGATGTTGAGTTTCAAATCGGTACTAGTTCAGCTTCATCACTAGGTAACAGTGGTGGAGCTATGTTGTCAAATGGCCTTGGGGAGCAATGGAGGTTGAACAATCTGCAACAAGTTCAGCAGCAGTTTCCATTTTTGAGCACTAATTTGGAGCCACAGATTGGGTTGTTTCAGTTTGGTGGTGGAGAAAACAATAATGCTGAACCACCAAGTTATGCAAAGGATGGAGGCCGGTTTAATATTCGTTCTAAACTAGATTCTATTTCTAGTCTAAGTGGGATAATGCCTCAGATTAACACGATAAAGCTGGAAGAAAGCCAAGGTTTGAGTTTGCCAAAAAATCTCTTGATGGGTAGTTCAGGAAATGATGTACTTTGGAATAATGGAAGTGGCAATGCATGGAGTGAACTTCCTTGTTTCACTCCTTCACATAACCACTTGTTGTGA 1095 0.4575 MVFPSLPIYLDPPNWSQQQPNQPAGIGNQNPHTPPPLQPPPSSVTAVIGGGGGGYQGSIRPGSMADRARMAKIHQPDAALKCPRCESANTKFCYYNNYSLSQPRHYCKTCRRYWTRGGALRNVPVGGGCRRNKRNKGSSGRSKSPMKPSTGSTSASANSSSSGCTTDHVMMAHLPTPTQTQFPFLTSLHHYNSDYVSGGIGSHFGAITTPLVARNDSDVEFQIGTSSASSLGNSGGAMLSNGLGEQWRLNNLQQVQQQFPFLSTNLEPQIGLFQFGGGENNNAEPPSYAKDGGRFNIRSKLDSISSLSGIMPQINTIKLEESQGLSLPKNLLMGSSGNDVLWNNGSGNAWSELPCFTPSHNHLL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03134 364 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 70 237 IPR045174 GO:0003700|GO:0006355
Phco3g03134 364 MobiDBLite consensus disorder prediction 11 62 - -
Phco3g03134 364 MobiDBLite consensus disorder prediction 141 164 - -
Phco3g03134 364 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Phco3g03134 364 Pfam Dof domain, zinc finger 78 134 IPR003851 GO:0003677|GO:0006355
Phco3g03134 364 MobiDBLite consensus disorder prediction 11 28 - -
Phco3g03134 364 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Phco3g03134 364 MobiDBLite consensus disorder prediction 124 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03134 Phco-Chr3 57263130 57264451 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco3g03134 zf-Dof 4.6e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g03134 3 57263130 57264451 Phco3g03134 3 57263130 57264451 ECH