Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03117 ATGCCCAGAACTAGGGACAGTGAAATAGTTTGTTTTGGACGAGAATATCCCTGGGGACATTCTTGCTTTTTATTCTCTCCCCGCATCGTACGCCGCCGACACAGCTTCGAGTCAGGGCAAGTGCTAACATACGCCTCTGACACCAAAACAACGCTCTCTGCTCCCATAGAGAAGGCGATGGTGAACGTGATGGAGTGGCAGAAGCAGCGTTGGCAACCCAACGGCAACGCGGAAATGATGTACGTCAAAGTCATGACCGACGAACAACTCGAGACTCTCCGCAAACAGATTGCGGTTTACGCAACAATCTGCGAACAACTCGTCGAGATGCACAAAACCATCTCTTCTCACCAAGATCTCGCAGGGATTAGACTGGGTAATATGTACTGCGATCCTTTCTCTGGTGGGCACAAAATATCTTCGAGGCAGAGGTGGACTCCGACGGCTATGCAGCTTCAGATTCTGGAGCGGATATTTGATCAGGGAACTGGGACTCCCAGCAAAGAAAAGATCAAGGATATCACTGCTGAGCTCAGCCAGCATGGCCAGATTTCTGAGACTAATGTGTATAACTGGTTTCAGAACAGGCGGGCTCGCTCCAAAAGAAAGCAGCAGAATGTGGCACCTGGTGTTAATGCTGAATCAGAAGTAGAGACCGAGGTTGATTCCAAAGATAAGAAGACAAAGGCAGACGATTTTTGGTCCCAGCACAGTGTTTCTGCTGGGCCTTCTGATAATTTAGGTTTCCAGAACCATGATGATCTGCAGTACTTGAATGAGAATCCAGAGTCCAACAAACCAGATTCTGTTTTCCCGTCTGATGGGAGTTTAAGATCCACTAGAAATTTCAACCATGTGCCTGTTTTCGATGGGCTGCTATCGAACCCCGGGAACGGCTATCTTACTGGAAAAATGGAAGCCACTGAGAACTACGACTTGTATCAGCCATCAGACGATTTCGACATGGCAGGCTGA 975 0.4831 MPRTRDSEIVCFGREYPWGHSCFLFSPRIVRRRHSFESGQVLTYASDTKTTLSAPIEKAMVNVMEWQKQRWQPNGNAEMMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTISSHQDLAGIRLGNMYCDPFSGGHKISSRQRWTPTAMQLQILERIFDQGTGTPSKEKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPGVNAESEVETEVDSKDKKTKADDFWSQHSVSAGPSDNLGFQNHDDLQYLNENPESNKPDSVFPSDGSLRSTRNFNHVPVFDGLLSNPGNGYLTGKMEATENYDLYQPSDDFDMAG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03117 324 MobiDBLite consensus disorder prediction 201 277 - -
Phco3g03117 324 SUPERFAMILY Homeodomain-like 141 205 IPR009057 -
Phco3g03117 324 PANTHER WUSCHEL-RELATED HOMEOBOX 13 64 322 IPR044559 GO:0003700
Phco3g03117 324 CDD homeodomain 142 204 IPR001356 GO:0003677
Phco3g03117 324 Gene3D - 143 208 - -
Phco3g03117 324 Pfam Homeodomain 142 202 IPR001356 GO:0003677
Phco3g03117 324 MobiDBLite consensus disorder prediction 217 233 - -
Phco3g03117 324 ProSiteProfiles 'Homeobox' domain profile. 138 203 IPR001356 GO:0003677
Phco3g03117 324 SMART HOX_1 140 207 IPR001356 GO:0003677
Phco3g03117 324 MobiDBLite consensus disorder prediction 234 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03117 Phco-Chr3 57145496 57148783 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco3g03117 Homeodomain 9.6e-18 CL0123