Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03055 ATGTTTAGGAAAAGGCACATCGCTTCTTCTCTTGCTAGGGAATTGTTGGCACTCCAGCCACTTCTTATCCTCTTCCTGTTCAGCTTGCACCACAACACTGTGCAATGTCAAGGAAGGTTGAGTAAACATGTTTCTTCAGAGCCTCCCTCACCTTCTAGGACATCACCGTCATCATCAGGATACAAGGATGACCCCAAGAAGATAATTTTGAGCATGGTGCTAGGAGCAGTAACTGGTCTAGTTTGTTCTGTTCTCTTTGCACTTGTGGTACGTTGTGTGGTACAGTACCTGAACCGCACACCAATCCTCAAGGGGCCTGTTATATTCTCCCCCAAAATTGCCCCCAAGACACTCCAATTAGCTTTGGCTAAGGAAAACCACTTGCTTGGTTCGAGTCCTAATGGCAAATACTACAAAACTGTGCTGGACAATGGACTCACTATTGCAGTGAAAAGGCTAACACCCTTTGAGAGCAACTCTCCTGAGGCTAAGAAAAATTCAGTGAAGAGGCAGATACAAACTGAGCTAGAGCTTCTTGCAAGCGTAAGACACAGGAACTTGATGAGTTTGAGGGCCTATGTTCGTGAGCCTGATGGTTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTTGCTGATGTGATGAATAGAGTGTGGGAGAATGAGTTGCCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACTTGTGCCCCTCAGATTCTGCACTACAGCTTGAAGCCAACAAATGTGATGCTGGATGCTGATTTTGAACCCAGATTAGCAGACTATGGCTTGGCCAAACTTCTACCCAACTTGGATAGAGGAACTTCTCTCTACACACCTCCTGAATGTTTCCACAATTGCAGCAGGTACACAGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACGGGTAAGGACCCTACAGATCCATTTTTTGGAGAAGCAGCCAGTGGGGGAAGTTTGGGATGTTGGCTGAGACACTTGCAGCAAGCAGGTGAGGCGCGGGATGCCCTAGATAAGAGCATGTTAGGGGAAGAAGGAGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGACGAGCTTGCTCACATGCTAACGCAACTGCACAGTTTTTGA 1218 0.4647 MFRKRHIASSLARELLALQPLLILFLFSLHHNTVQCQGRLSKHVSSEPPSPSRTSPSSSGYKDDPKKIILSMVLGAVTGLVCSVLFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQLALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEAKKNSVKRQIQTELELLASVRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVMNRVWENELPFGWEVRLRIAVGVVKGLQYLHFTCAPQILHYSLKPTNVMLDADFEPRLADYGLAKLLPNLDRGTSLYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEARDALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELAHMLTQLHSF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03055 405 SUPERFAMILY Protein kinase-like (PK-like) 126 399 IPR011009 -
Phco3g03055 405 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 31 401 - -
Phco3g03055 405 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 207 404 - -
Phco3g03055 405 CDD STKc_IRAK 129 402 - -
Phco3g03055 405 ProSiteProfiles Protein kinase domain profile. 123 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03055 405 Pfam Protein kinase domain 125 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03055 405 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 115 206 - -
Phco3g03055 405 Gene3D Transferase(Phosphotransferase) domain 1 207 404 - -
Phco3g03055 405 Gene3D Phosphorylase Kinase; domain 1 116 206 - -
Phco3g03055 405 MobiDBLite consensus disorder prediction 40 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03055 Phco-Chr3 56679226 56681119 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Phco3g03055 Pkinase 1e-31 CL0016