Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03051 ATGGCTCTGGACCAGCCTTCCAATCCAAACGCCGTTGACGGGGCGGGTAACGGCGCGACGCCTTGCTCCGCCGCGGACGGAGGCGACGACGGGAGGCCGGCGGCGAGGCTGCCGCGGTGGACGCGGCAGGAGATTCTGGTGCTGATTCAGGGGAAGAGCGACGCGGAGAACCGGTTCAGACCGGGTCGGGGTAGCGGTTCGGCTTTCGGATTGAGCGAACCGAAATGGGCGCTGGTGTCGGCGTACTGCAAAAAACACGGCGTGAACCGGGAGCCGGTGCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTTGCAGGTCAGAGACGAAACGGACTCGTTTTGGCTCATGAGGAATGATTTGAGGAGGGAGAGGAAATTGCCCGGTTATTTTGACAGGGAAGTGTATAATATTCTTGATTCGCCGTCCACGGCGGCTGCTGCGACGGTCGAGACTCCTACGGCGGCGGTGGAGGCGGCGGGGGATGAGGAAGTGCACCTGTATGATAGTAATCGGAGAGTTGGGAGTGATGATGGGTTGTTCTCTGATTGTGAGAAGGAGGATGTGTTCCTTGTAGCCCCTGCCAAGGATGTTCCTGCACCTGTTCCAATCTCAGAGAAGCAGTTTCAACCACTCCTTCGACTATGTGAAGGAGAAGGTACTACCAATGAGAAACGTGCAACCCCAAATCCAGAAATGGGATCTACATCTCAAGGGGGACGGAAGAGGAAGCGATTTTCCGATGCAGAGGAGGAAAGTTTGCAAAGTCAATTAATTGACGTCTTAGAAAAGAATGGCAAAATGCTTCGTGATCACCTTGAATCTCAGAACGCCAATTTCCAATTGGACCGCCAGCAGCAGAAAGACACTGCGACTAACATAGTTGCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTGTAG 966 0.5445 MALDQPSNPNAVDGAGNGATPCSAADGGDDGRPAARLPRWTRQEILVLIQGKSDAENRFRPGRGSGSAFGLSEPKWALVSAYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWELQVRDETDSFWLMRNDLRRERKLPGYFDREVYNILDSPSTAAAATVETPTAAVEAAGDEEVHLYDSNRRVGSDDGLFSDCEKEDVFLVAPAKDVPAPVPISEKQFQPLLRLCEGEGTTNEKRATPNPEMGSTSQGGRKRKRFSDAEEESLQSQLIDVLEKNGKMLRDHLESQNANFQLDRQQQKDTATNIVAVLDKLADALGRIADKL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03051 321 Pfam Myb/SANT-like DNA-binding domain 39 124 IPR044822 -
Phco3g03051 321 Gene3D - 40 108 - -
Phco3g03051 321 ProSiteProfiles Myb-like domain profile. 32 103 IPR001005 -
Phco3g03051 321 CDD GT1 38 110 - -
Phco3g03051 321 MobiDBLite consensus disorder prediction 232 246 - -
Phco3g03051 321 MobiDBLite consensus disorder prediction 1 38 - -
Phco3g03051 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 6 321 - -
Phco3g03051 321 MobiDBLite consensus disorder prediction 229 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03051 Phco-Chr3 56658975 56662526 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco3g03051 Myb_DNA-bind_4 2.9e-12 CL0123