Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03002 ATGTGCAAACCTAGGAATTCATGCAGCTTGTCTGTACCTCGTTCTTATTATGGCATTGGATTTGAATCATTGAACAGGAGAACAAATATGGCTCCACTCTCAATAAGAATAGGCCTCGCTGGACTGGCTGTTATGGGCCAAAATCTAGCACTCAATATTGCTGAGAAAGGCTTTCCTATTTCTGTTTATAACCGAACCACATCCAAGGTTGATGAGACTGTAGAACGAGCAAAACTCGAAGGAAATCTTCCAGTTTATGGCTACCATGATCCTGAAGCTTTTGTTCATTCAATTCGAAAGCCTAGGGTGATAATAATGCTTGTTAAGGCTGGGGCACCTGTTGACCAAACCATTAAGACCCTGTCTGCCTTCATGGAAAAAGGAGACTGTATAATTGATGGTGGTAATGAATGGTATGAGAACACTGAAAGAAGAGAGAAAGCAATGACTGAATTGGGTTTTCTCTACCTTGGTATGGGAGTTTCTGGCGGTGAGGAAGGTGCTCGTAATGGGCCCTCTTTGATGCCTGGTGGTTCGTTTGAAGCTTTCAAAAACATAGAAGATATTCTTCTCAAGGTGGCAGCTCAAGTCCCGGATAGTGGTCCTTGCGTGACATATATTGGTAAAGGCGGTTCTGGTAATTTTGTGAAGATGATTCACAATGGTATTGAATATGGTGATATGCAGCTGATTGCAGAGGCTTATGATGTGCTGAAGTCAGTTGGCAAGTTGTCAAATGAGGAACTACAAAGTGTCTTCTCTGAATGGAACAGAGGAGAACTCCTTAGTTTCCTGATTGAAATCACCGCAGATATATTTGGAATTAAGGATGATAAAGGAGATGGATATCTTGTTGACAAGGTTCTAGACAAGACTGGCATGAAGGGTACTGGTAAGTGGACTGTTCAGCAAGCTGCTGAATTATCAGTTGCTGCTCCCACTATTGAAGCATCATTGGATGCAAGGTTTCTGAGTGGCTTGAAGGAGGAAAGAGTAGAAGCAGCAAAAGTCTTTAAATCAGGTGGCTTTGGTGATATTGTGACTGATCAACCTGTAGACAAGCAGCAGTTGATTGATGATGTTAGGAAGGCTCTTTATGCAGCCAAAATCTGTAGTTATGCACAGGGAATGAATCTGATCCGTGCAAAGAGTATCGAAAAGGGATGGGATTTGAAGTTGGGTGAACTGGCCCGAATTTGGAAAGGGGGTTGCATCATTAGAGCTATATTCTTAGACAGAATTAAGCAGGCATATGATAGAAACCCTAATCTGGCAAACCTTCTTGTTGATCCAGAGTTTGCAAAGGAAATAATTGATCGCCAATCTGCCTGGAGGAGAGTTGTTTGCCTTGCTATCAATTCTGGTATCAGCACTCCAGGTATGTCTGCTAGCCTTGCTTATTTTGATACTTACAGAAGGGACAGGTTGCCTGCTAATTTGGTGCAAGCTCAGCGTGACTACTTTGGTGCACATACATATGAAAGGGTTGACATAGAGGGGTCTTACCATACTGAGTGGTTCAAGCTTGCCAAACAGTCAAGAATTTAG 1548 0.4251 MCKPRNSCSLSVPRSYYGIGFESLNRRTNMAPLSIRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKLEGNLPVYGYHDPEAFVHSIRKPRVIIMLVKAGAPVDQTIKTLSAFMEKGDCIIDGGNEWYENTERREKAMTELGFLYLGMGVSGGEEGARNGPSLMPGGSFEAFKNIEDILLKVAAQVPDSGPCVTYIGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQSVFSEWNRGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAAELSVAAPTIEASLDARFLSGLKEERVEAAKVFKSGGFGDIVTDQPVDKQQLIDDVRKALYAAKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAIFLDRIKQAYDRNPNLANLLVDPEFAKEIIDRQSAWRRVVCLAINSGISTPGMSASLAYFDTYRRDRLPANLVQAQRDYFGAHTYERVDIEGSYHTEWFKLAKQSRI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03002 515 PRINTS 6-phosphogluconate dehydrogenase signature 284 311 IPR006183 GO:0004616
Phco3g03002 515 PRINTS 6-phosphogluconate dehydrogenase signature 202 230 IPR006183 GO:0004616
Phco3g03002 515 PRINTS 6-phosphogluconate dehydrogenase signature 153 178 IPR006183 GO:0004616
Phco3g03002 515 PRINTS 6-phosphogluconate dehydrogenase signature 396 418 IPR006183 GO:0004616
Phco3g03002 515 PRINTS 6-phosphogluconate dehydrogenase signature 100 129 IPR006183 GO:0004616
Phco3g03002 515 PRINTS 6-phosphogluconate dehydrogenase signature 35 58 IPR006183 GO:0004616
Phco3g03002 515 PIRSF 6PGD 30 514 IPR006113 GO:0004616|GO:0006098
Phco3g03002 515 NCBIfam decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 37 507 IPR006113 GO:0004616|GO:0006098
Phco3g03002 515 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 35 511 IPR006183 GO:0004616
Phco3g03002 515 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 36 208 IPR006115 GO:0050661
Phco3g03002 515 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 211 508 IPR008927 -
Phco3g03002 515 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 33 214 - -
Phco3g03002 515 Gene3D - 476 508 - -
Phco3g03002 515 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 213 506 IPR006114 GO:0004616|GO:0006098
Phco3g03002 515 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 215 474 - -
Phco3g03002 515 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 209 IPR036291 -
Phco3g03002 515 SMART 6PGD_2 213 507 IPR006114 GO:0004616|GO:0006098
Phco3g03002 515 Gene3D - 217 473 IPR013328 GO:0016491
Phco3g03002 515 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 475 508 - -
Phco3g03002 515 Gene3D - 35 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03002 Phco-Chr3 56291700 56293542 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01515 5 50899509 50907061 Phco3g03002 3 56291700 56293542 PCT