LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco3g02973	ATGTTTTTGGTTAGAGAGGTAATTAAGGAAGTTGGTTTTTTGCACTACTCACCTGTGGAGACCTTCATGGAGGGTACTGTCACAGATAGATCTGATGTTTACGCATTTGGTATGGTTCTACTGGAAGTAGTGGGGGCAAGAAGAATTTTAGAATCGGATTATTTTGGAGTAACAGGAGAAGCACTGGAGAAGAAGTGTGTTGAGGAGAATATTGATCCGAAAATCAAAGGGAAGATTGCACCAGAGTGTTGGAAAGTCTTTATAGATATCACCTTAAGATGCATAAAGAAGGAACCTGATGAACGACCAACAATGGGTGAAGTTGAGGTGGAACTTGAGCTTGCTCTATTGTTGCAGGAACAAGCAGATGTCACAAACATCAATAGTGATTATACCTTATTGTCCAAAACCATTATTATCCCAAAATCAGACGGGGGATTTGACGTGGCAAAGCTTTTAAATTTAGTGCCTTTCATCTCTGTTTCCTCATCCAGATACAGCAGGATCATGAGCGGGACTTCTGAAAAGAAGCTTGTAAGAATTGATGTTAGTTCTGATACTGTGTGTCCATGGTGCTTTGTTGGCAAAAAAAATCTAGACAAGGCCATAGCTGCCTCTAATGATAAGTACAACTTTGAGATAATATGGCATCCCTTTCAACTTAACCCTGATGCCCCTAAAGAAGGCATTGACAAGAGGGAGTATTACAGAAGAAAGTTTGGATCCCAATCAGAACAGATGGAAGCTCGGATGTCAGAGGTGTTCAAGAATGTTGGTCTGCAATATAGTTTATCTGGACTCACGGGAAACACCATGGACAGCCACAGGCTTATATATTTTGCTAGACAGCAGGGTCTTGACAAGCAGCATGATCTAGTTGAAGAACTTAATATTGGCTATTTCACACAGGGAAAATACATTGGTGACCATAAGTTTCTTCTGGAATCTGCTGCAAAGGTTGGTATAGAAGGAGCAGAAGAGTTTCTTAAGAACCCCAACAGTGGTTTGAGGGAGGTTGAGGAGGAGCTGAAAACATATTCAGGGAACATTACAGGTGTTCCATATTATGTGATTAATGGAAATCACAAGTTGAGTGGTGGACAACCCCCTGAAGTCTTCTTGAGAGCTTTCCAGGTTGCTACAACTTGA	1149	0.4108	MFLVREVIKEVGFLHYSPVETFMEGTVTDRSDVYAFGMVLLEVVGARRILESDYFGVTGEALEKKCVEENIDPKIKGKIAPECWKVFIDITLRCIKKEPDERPTMGEVEVELELALLLQEQADVTNINSDYTLLSKTIIIPKSDGGFDVAKLLNLVPFISVSSSRYSRIMSGTSEKKLVRIDVSSDTVCPWCFVGKKNLDKAIAASNDKYNFEIIWHPFQLNPDAPKEGIDKREYYRRKFGSQSEQMEARMSEVFKNVGLQYSLSGLTGNTMDSHRLIYFARQQGLDKQHDLVEELNIGYFTQGKYIGDHKFLLESAAKVGIEGAEEFLKNPNSGLREVEEELKTYSGNITGVPYYVINGNHKLSGGQPPEVFLRAFQVATT	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco3g02973	382	SUPERFAMILY	Thioredoxin-like	179	378	IPR036249	-
	Phco3g02973	382	CDD	DsbA_FrnE	181	378	-	-
	Phco3g02973	382	Gene3D	Transferase(Phosphotransferase) domain 1	5	134	-	-
	Phco3g02973	382	PANTHER	GLUTATHIONE S-TRANSFERASE KAPPA	168	379	-	-
	Phco3g02973	382	Gene3D	Glutaredoxin	178	380	-	-
	Phco3g02973	382	Pfam	Protein tyrosine and serine/threonine kinase	14	110	IPR001245	GO:0004672\|GO:0006468
	Phco3g02973	382	Pfam	DSBA-like thioredoxin domain	181	377	IPR001853	GO:0016491
	Phco3g02973	382	ProSiteProfiles	Protein kinase domain profile.	1	117	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phco3g02973	382	SUPERFAMILY	Protein kinase-like (PK-like)	10	114	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco3g02973	Phco-Chr3	56066207	56071713	Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Phco3g02973		DSBA	8.7e-35	CL0172