Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02950 ATGTTTCTCAAATATTGGGGCTTCTGGCATTCGAAGCGCACAAGTTCATGTCAGTATACAACAAGAATAGAAGAGCTGTGCCATCAGTTCTCTCTTGCTGATATTAGGAAATCAACCAACAACTTTGATCGTAAGAGGTTCATTGACAGTCAAGGATTTGATATCAAATTATATAAAGGCTGTCTTCAGCATGATGGTTCTGATTATACAGTCACTATAAAGCGATTTAATGAGGATGCAAGAGGGAATCATCAATGGAACCTGCATATGTTTAAGAATGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATATTGTCTCTCTTACTGGATTCTGCAACCACAAGAAAGAGAAGATTGTTGTGTTCGAGTACATGCCCAATGGATCTCTGCGTCGTCACCTAAAACGTGGGGAACTGTCATGGAAGAAGAGGCTAGAGATATGCGTAGGAGTAGCAAGGGGATTGCACTACCTTCATGCTGGAGCAAAGCGCACCATCGTTCACCGTGATATTCACACTCGCAACATCCTTTTGGATGCAAACATGGAGCCAAAGCTTTCAGATTTTGGCTTTAGCTTACAGGGACAACGTTTTATGTCAAAGCCAAAGCCAATTATAGTAGATTCTATTGCTGGTACTTATGGCCACATGGCTCCGGAGTATGTCATGAACGGTATCGTCACAGATAAAACCGATGTTTACTCATTTGGTATGGTTCTATTAAAAGTTGCGTGTGGAAGAGCGTATTCTAACATGAGAGAGGAATTTCTGGAGAAGCCTGTTGAGGAGAATATTGATTTGGATATCAAAGGAAAGATTGTGCAAGAGTGTTGGAAAGTGTTTATAGATATCATCCAAAGATGTCTGAATTCTGAAGCAGATGAGCGGCCAACAATGGGTGAGGTAGAGGTGCAACTTGAGTATGCTCTGTCGTTGCAAGAACAAGCAGATATCACAAACATCCATGCTGATAATATCTTATTGTCAAAAACCACTATTAAACCTTATTTTTTCTTCTAG 1023 0.4066 MFLKYWGFWHSKRTSSCQYTTRIEELCHQFSLADIRKSTNNFDRKRFIDSQGFDIKLYKGCLQHDGSDYTVTIKRFNEDARGNHQWNLHMFKNEIELLCQLRHPNIVSLTGFCNHKKEKIVVFEYMPNGSLRRHLKRGELSWKKRLEICVGVARGLHYLHAGAKRTIVHRDIHTRNILLDANMEPKLSDFGFSLQGQRFMSKPKPIIVDSIAGTYGHMAPEYVMNGIVTDKTDVYSFGMVLLKVACGRAYSNMREEFLEKPVEENIDLDIKGKIVQECWKVFIDIIQRCLNSEADERPTMGEVEVQLEYALSLQEQADITNIHADNILLSKTTIKPYFFF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02950 340 FunFam Receptor-like protein kinase ANXUR2 126 329 - -
Phco3g02950 340 Gene3D Phosphorylase Kinase; domain 1 7 125 - -
Phco3g02950 340 PRINTS Tyrosine kinase catalytic domain signature 161 179 IPR001245 GO:0004672|GO:0006468
Phco3g02950 340 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Phco3g02950 340 PRINTS Tyrosine kinase catalytic domain signature 232 254 IPR001245 GO:0004672|GO:0006468
Phco3g02950 340 PRINTS Tyrosine kinase catalytic domain signature 123 136 IPR001245 GO:0004672|GO:0006468
Phco3g02950 340 PANTHER OS07G0166700 PROTEIN 26 314 IPR045272 GO:0004714|GO:0006468
Phco3g02950 340 Pfam Protein tyrosine and serine/threonine kinase 56 306 IPR001245 GO:0004672|GO:0006468
Phco3g02950 340 ProSiteProfiles Protein kinase domain profile. 42 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02950 340 SUPERFAMILY Protein kinase-like (PK-like) 16 307 IPR011009 -
Phco3g02950 340 FunFam Receptor-like protein kinase ANXUR2 8 125 - -
Phco3g02950 340 Gene3D Transferase(Phosphotransferase) domain 1 126 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02950 Phco-Chr3 55896266 55897365 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco3g02950 PK_Tyr_Ser-Thr 1.8e-46 CL0016