Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02949 ATGTACACAACTTGCATACCAATTGCTTTGGCGACCATCCTCTTCCTCCTCCTCCTCTTGTTGTGCCACCCTTACCTTTCCACCGCAGACGTTATTTACCGTCCCGTTGACCATTTCACCATAAACTGTGGCTCCGCTATAAACTTCACTCTCGATGGTCGGAACTGGACTGGAGATAGCAATACCAAATTCCTCTCCGACAGAAAGGACTCAGTTGCTGCTCCTGCACAGATACAATCAACAATACAGGGCCCTTACACTTATGCTCGCCTCTCTTATTCCCAATTCAACTACTCCTTCCCCGTCACCACACAAGGCCCCTTCTTCCTTCGTCTCTTCTTCTACTCAACTTCATACCAAATGTTTGACCGCTCCAAAGCCTATTTCTCAGTCAAAGCCGGCCCATACACCCTCCTTCAACATTTCAATGCTTCCCTGTATGCTGATACTGATGACGACCCTGGCCTCCACGACACCTTGTTCAGAGAGTATTGCATCTACCTCCAACGTGGTGAGAGCCTCAACATAACCTTCACTCCAAGCACCACAGATTCGTACGCTTTCATCAATGGAATCGAGATTGTTTCAATGCCCTCTTATCTCTACTACTCCAACCCTAACTACACCGTTCTTGACGACTTCATTAGATTGCCACAACTTGTTGGTCAAATGAACCAAGTATATATCATTACAAACAACGTTTCTCTCGAGACGAAGCACCGGTTGAATGTTGGAGGAGCACAAATCTCCCCCTCGCAGGACACTGGCATGCTCAGGGCCTGGGATACGGATGATAAATACCTAATTACTGACAGTGGATCATCTGTTGATTTTATGCAAAAAACCAATCTCAGCTTCGTTAAGACTCCTAACTACACGGCACCGGACCAAGTATACCGAACCGTAAGGAATATTGGATTGAATCCCTTTAAGAACCTGACATGGCAGTTTCCGGTTTATTCTGGCTTCTTCTACTTGCTAAGGTTACATTTTTGTCAGCTCAACCCGGAGGTTCAAGACCCTGGAAACCAAATATTCTACATCTTCATTCAGCAACAGATGGCTGAAAGAGGTGCAGACATTCTCATGTGGAGCGACAACCAGAAGGGTGCACCAGTGGTTAAAGACTACGTAGTTTACATTCCAGGGAATAGGGAAAAGGTATATCTTTCACTAGAAATGCATCCTCATCCTAAAATCTTAATCGAGGATGCACAACTTAATGCAATTGAACTCTTCAAAATCAACGACACAACAGGTAGTCTCGCTGAACCGAACCCAGATCCTCTTCCAAAAACCCTCGATAAGCAAATATCAGAGCAGAAAAGTAGCGGCACCACGAGACCTCTAATTGCAGCCGTCGCAGGTGCACTTTCTGGTGTCGTTTTACTCTTCCTTATAGTCGCTTGTTTCATCACCAAATGCAAGCAGAACGTTGTCGTTTACAAAAACCAAAAAGATGGAACTTCTGGCGAGGGTGGCTCATCATCGCTACCAACCAACCTCTGCCGTCACTTCTCAATCGCAGAAATCAGGGCCGCCACAAATAACTTCGACAAACTCTTCGTCGTAGGAGTGGGAGGCTTCGGCGACGTGTACAAAGGCTACATCGACAACGGCTCAACACCTGTCGCTATCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTCTGAACGAGTTCATGAACGAGATCGAAATGCTCTCTAAACTTCGTCATGTCCATCTTGTTTCCCTCGTCGGTTACTGCTACGAGACCAACGAGATGATACTCGTTTACGATTTAATGGATCGTGGATCCCTCCGTGACCATCTCTACGGAACCGATAACCCTCCGCTCTCATGGAATCAAAGGCTTCAGATATGCATCGGCGCCGCAAAAGGACTGCATTATCTGCATGCAGGTGCGAAACAAATGATCATTCACCGTGACGTGAAGAGCACTAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTCGGGTTATCTCGAATTGGGCCCATGGGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAAGGCAGTATTGGGTATTTGGATCCGGAGTATTACAAACGACAGCGTTTGACGGAGAAGTCGGACGTTTACTCGTATGGGGTGGTGCTGTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTCCGAATGGTAGAGAACCCACAGGTGTCACTTGTGGATTGGGCGAAGCATTGGTATGAGAAGGGGTCTCTGGGTGAGATTGTGGATCCAGCACTGAAGGGGCAGATAGCACCTCAGTGTTTGCGAAAATTTGGTGAGGTTGCGTTGAGCTGTTTGCTTGAGGATGGGACTCAGCGACCTTCCATGAACGACGTGGTTGGGGTGTTGGTGTTTGTTCTGCAACTTCAGCTTCAGGATAGTGCTAATGTGAATGCAGTGTTGGAAAGTGGTGGGGATTGTGAAGACAGTACTACTGAGGACATGTTTAGCAGCACGCATACTAGTGTGCATGCTTCAGACTATAGTAACAGCAGTGGATTCAACAGTACAAGCTACGGGAGTAAGCAATCTGACAGGTTGATCTCAGAGCTTGTTTTCTCTGAGATTAAGGATCCAAAGGGACGCTGA 2610 0.4705 MYTTCIPIALATILFLLLLLLCHPYLSTADVIYRPVDHFTINCGSAINFTLDGRNWTGDSNTKFLSDRKDSVAAPAQIQSTIQGPYTYARLSYSQFNYSFPVTTQGPFFLRLFFYSTSYQMFDRSKAYFSVKAGPYTLLQHFNASLYADTDDDPGLHDTLFREYCIYLQRGESLNITFTPSTTDSYAFINGIEIVSMPSYLYYSNPNYTVLDDFIRLPQLVGQMNQVYIITNNVSLETKHRLNVGGAQISPSQDTGMLRAWDTDDKYLITDSGSSVDFMQKTNLSFVKTPNYTAPDQVYRTVRNIGLNPFKNLTWQFPVYSGFFYLLRLHFCQLNPEVQDPGNQIFYIFIQQQMAERGADILMWSDNQKGAPVVKDYVVYIPGNREKVYLSLEMHPHPKILIEDAQLNAIELFKINDTTGSLAEPNPDPLPKTLDKQISEQKSSGTTRPLIAAVAGALSGVVLLFLIVACFITKCKQNVVVYKNQKDGTSGEGGSSSLPTNLCRHFSIAEIRAATNNFDKLFVVGVGGFGDVYKGYIDNGSTPVAIKRLKPGSQQGLNEFMNEIEMLSKLRHVHLVSLVGYCYETNEMILVYDLMDRGSLRDHLYGTDNPPLSWNQRLQICIGAAKGLHYLHAGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPMGSSMTHVSTQVKGSIGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMVENPQVSLVDWAKHWYEKGSLGEIVDPALKGQIAPQCLRKFGEVALSCLLEDGTQRPSMNDVVGVLVFVLQLQLQDSANVNAVLESGGDCEDSTTEDMFSSTHTSVHASDYSNSSGFNSTSYGSKQSDRLISELVFSEIKDPKGR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02949 869 SUPERFAMILY Protein kinase-like (PK-like) 495 792 IPR011009 -
Phco3g02949 869 Pfam Malectin-like domain 41 415 IPR024788 -
Phco3g02949 869 Gene3D - 235 416 - -
Phco3g02949 869 Gene3D - 38 198 - -
Phco3g02949 869 FunFam FERONIA receptor-like kinase 38 198 - -
Phco3g02949 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Phco3g02949 869 PANTHER OS03G0124300 PROTEIN-RELATED 12 478 IPR046957 GO:0004672
Phco3g02949 869 ProSiteProfiles Protein kinase domain profile. 518 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02949 869 SMART serkin_6 518 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02949 869 Gene3D Transferase(Phosphotransferase) domain 1 595 809 - -
Phco3g02949 869 ProSitePatterns Protein kinases ATP-binding region signature. 524 547 IPR017441 GO:0005524
Phco3g02949 869 MobiDBLite consensus disorder prediction 420 441 - -
Phco3g02949 869 Gene3D Phosphorylase Kinase; domain 1 503 594 - -
Phco3g02949 869 FunFam Receptor-like protein kinase FERONIA 491 594 - -
Phco3g02949 869 Pfam Protein tyrosine and serine/threonine kinase 524 788 IPR001245 GO:0004672|GO:0006468
Phco3g02949 869 CDD STKc_IRAK 533 790 - -
Phco3g02949 869 FunFam Receptor-like protein kinase FERONIA 595 810 - -
Phco3g02949 869 FunFam FERONIA receptor-like kinase 234 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02949 Phco-Chr3 55858936 55861545 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco3g02949 Malectin_like 2.1e-31 CL0202