Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02945 ATGGACACTACTTGCAGGCAAAGTGCTTCAGGAACCATTCTCCTTCTCCTTCTCTTGCAGTTGTGGTGCCTCTCTTTCCTTTCCATTGCAGAAGATATTTATGATCCCACTGAGCTCTTCAGCATCAGCTGTGGCTCATCCACCAACTTCTCCCCTCTCGACACTCGGAATTGGACTGCAGACATCCACTTCCTCTCTCCAACCACCCATCTCTCAGTTTCTGCTCCTTCACTCACACCATCTACCCAACAGGGTCCTTACACCCATGCTCGTCTCTCTCACTCCCCGTTCACTTACTCATTCCCTCTCACACCAGGCCCCAAGTTCATTCGTCTCTTCTTCTACTCAACTTCATACCAAAACTTCAACCGCTCCCAAGCATGTTTCTCAGTCAAAGCAGGCCCGTATACCCTCCTTCAAGGTTTCAACGCTTCCCTCAACGCCGATGCTGATGATGACCCTAGCCACTCTGATATCTTGTTCAGAGAGTATTGCATTAACCTCCAAGACGCTGAGAAGCTCAACATAACCTTCATTCCTAACACCACAGATTCCTACGCTTTCATCAACGGGATCGAGATTGTTTCGATGCCCCCTTATCTCTACTACACCGATCCTGATGACGACTCCACGGAGCAGCCTCAATATGTTGGCACCACGACCCCATATGTCATCGAGAACAAGTTTGCTCTCCAGACCATGTACAGGTTAAAAGCTGGTGACCATACAATCTCCTCCTCTGGGGACACTGGTATGCTCAGGACTTGGGATACCGATAGCAAGTACCTAGATACTCAAAGTGAAGAATCTCTTGAGTTTACGGCTACAACTAAGCTGAGCTTCACTAAAAAGACTCCTAACTACACGGCACCAGACCAAGTGTTCCGATCTGTAAGGAATATGGGAATGAATGGCTCTAACAACATCAAGAGCAACATCACTTGGCACTTTACCGTTGATTCCGGCTTCACCTACTTGCTAAGGTTATACTTTTGTGAGCTTAACCCCAGAATTGACGACGCTGGTATCCTGAGATTCTCCATCTTCATAGATGACCAGTTGGCTACCGATTGGGCAGACGTTTTCTTGTGGACCAAAAACTGGGGTGTGCCAGTGGTTAAAGAGTATGTAGTTATCATCTCAGAGAATCCGAAAAAAGTTAACCTTTCACTAAAAATGCATCCTCACCCTAAAAGCATGATCCCAGACACAGAAGTAAATGCAATTGAAATCTTCAAAATCAGCAATTATAAAGGTAGTCTTGCTGGACCAAATCCTGACCCTCCTACACAAACCGCAGTGGTTACCCATCAAGGCTCAAACAAGAAAAGGGGAGCCTCCAAGAAAACTCTTCCCGCCGTGACGGGGGCCGTTTTCGGCGTCCTTTTGCTCACTTTATTTATTGTCGCTTTCTTCCTCGTCAAACGCAAGAAGAACATCGCAGTTGAAAGTAAAAAGCACGGAACTTCTCGCGGGGGTGGCTCATCATCGCTACCAAGCAACCTTTGTCGTCACTTCTCAATCTCAGAAATCATAGCCGCCACCAATAACTTCGACGAACTCAACGTCCTTGGAGTGGGAGGCTTTGGCAACGTGTACAAAGGTTACATCGACGATTCAACACCTGTGGCAATCAAAAGGCTCAAACCGGATTCTCAGCAAGGTCTGAAAGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGTCATCTCCATCTTGTTTCTCTCATCGGTTACTGCTACGAGAGCAACGAGATGATCCTCGTTTACAATTTCATGGATCGTGGAACCCTTCGTGGCCATCTCTACGACACTGATAACCCTTTGCTCTCATGGAAGCAAAGGCTTCAGATATGCATCGGGGCCGCACGAGGACTGCATTATCTGCATACAGGTGCGAAACAAATGATCATTCACCGTGATGTGAAGAGCACAAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTCGGGTTATCTCGAATTGGGCCCACGGGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAAGGCAGTGTTGGGTATTTAGACCCGGAGTATTACAAACGACAGCGCTTGACGGAGAAGTCGGACGTGTATTCGTATGGAGTGGTGCTCTTAGAGGTATTGTGTGGGAGGCAGCCTTTGCTCCGAACGGTGGAGAAGCAACAGGTGTCACTTGTGAATTGGGCAAAGCATCGTTATGAGAAGGGATCTCTGGGTGAGATTGTGGATCCAGCACTGAAGGGGCAGATAGCACCTCAGTGTTTGCACAAATTTGGTGAGGTTGCGTTGAGCTGTTTGGTTGAGGATGGGACTCAGAGACCTTCCATGAATGATGTCGTTGGGATGTTGGAGTTTGTTCTGCAGCTTCAGCTTGAGGATAGTGCTGATGCTAATGTAGTGTGGGAGAGTAATGGGGATTATGAAGGCAGAACAACTGAGGACATGTTTAGCACTTCCCATAGTAATAGCAGTGGATTGAACACTAAAAGCTACGGGAACGAGGAATCTGACCAGTTGATCCCTGAGAATGTTTTTTCTGAGCTTAAAGTTCCAAAGGGACGCTGA 2583 0.4723 MDTTCRQSASGTILLLLLLQLWCLSFLSIAEDIYDPTELFSISCGSSTNFSPLDTRNWTADIHFLSPTTHLSVSAPSLTPSTQQGPYTHARLSHSPFTYSFPLTPGPKFIRLFFYSTSYQNFNRSQACFSVKAGPYTLLQGFNASLNADADDDPSHSDILFREYCINLQDAEKLNITFIPNTTDSYAFINGIEIVSMPPYLYYTDPDDDSTEQPQYVGTTTPYVIENKFALQTMYRLKAGDHTISSSGDTGMLRTWDTDSKYLDTQSEESLEFTATTKLSFTKKTPNYTAPDQVFRSVRNMGMNGSNNIKSNITWHFTVDSGFTYLLRLYFCELNPRIDDAGILRFSIFIDDQLATDWADVFLWTKNWGVPVVKEYVVIISENPKKVNLSLKMHPHPKSMIPDTEVNAIEIFKISNYKGSLAGPNPDPPTQTAVVTHQGSNKKRGASKKTLPAVTGAVFGVLLLTLFIVAFFLVKRKKNIAVESKKHGTSRGGGSSSLPSNLCRHFSISEIIAATNNFDELNVLGVGGFGNVYKGYIDDSTPVAIKRLKPDSQQGLKEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYNFMDRGTLRGHLYDTDNPLLSWKQRLQICIGAARGLHYLHTGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRTVEKQQVSLVNWAKHRYEKGSLGEIVDPALKGQIAPQCLHKFGEVALSCLVEDGTQRPSMNDVVGMLEFVLQLQLEDSADANVVWESNGDYEGRTTEDMFSTSHSNSSGLNTKSYGNEESDQLIPENVFSELKVPKGR 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02945 860 SMART serkin_6 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02945 860 CDD STKc_IRAK 524 790 - -
Phco3g02945 860 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Phco3g02945 860 SUPERFAMILY Protein kinase-like (PK-like) 495 792 IPR011009 -
Phco3g02945 860 MobiDBLite consensus disorder prediction 818 860 - -
Phco3g02945 860 FunFam FERONIA receptor-like kinase 39 198 - -
Phco3g02945 860 Pfam Protein tyrosine and serine/threonine kinase 522 788 IPR001245 GO:0004672|GO:0006468
Phco3g02945 860 Pfam Malectin-like domain 42 414 IPR024788 -
Phco3g02945 860 FunFam Receptor-like protein kinase FERONIA 594 810 - -
Phco3g02945 860 MobiDBLite consensus disorder prediction 425 441 - -
Phco3g02945 860 PANTHER OS03G0124300 PROTEIN-RELATED 14 479 IPR046957 GO:0004672
Phco3g02945 860 Gene3D Phosphorylase Kinase; domain 1 479 593 - -
Phco3g02945 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Phco3g02945 860 FunFam FERONIA receptor-like kinase 229 415 - -
Phco3g02945 860 ProSiteProfiles Protein kinase domain profile. 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02945 860 MobiDBLite consensus disorder prediction 818 846 - -
Phco3g02945 860 Gene3D Transferase(Phosphotransferase) domain 1 594 810 - -
Phco3g02945 860 FunFam receptor-like protein kinase FERONIA 480 593 - -
Phco3g02945 860 MobiDBLite consensus disorder prediction 422 447 - -
Phco3g02945 860 Gene3D - 37 197 - -
Phco3g02945 860 Gene3D - 229 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02945 Phco-Chr3 55841361 55843943 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco3g02945 Malectin_like 9.5e-39 CL0202