Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02942 ATGGACACAACTTACAGGCAAAGTGCTTCAGGAACCATTCTTCTTCTCTTGCAGTTCTGGTGCTTCTCTTTCCTTTCCATAGCAGAAGATATTTATGATCCCACTGAGCTCTTCAGCATCAGCTGTGGCTCATCCACCAACTTCTCCACTCTCGATCGGAATTGGACTGCAGACATTCACTTCCTCTCTCCAAGCAGCCATCTCTCATTTGCTGCTCGTCCACTCACACCATGTACCGAACAGGGTCCTTACACCCATGCTCGTCTCTCTCACTCCCCGTTCACTTACTCATTCCATCTCACACCAGGCCCCAAGTTCATTCGTCTCTTCTTCTACTCAACTTCATACCAAAACTTCAACCGCCCCCAAGCATGTTTCTCAGTCAAAGCAGGCCCGTATACCCTCCTTCAAGGTTTCAATGCTTCCCTCAACGCCGATGCTGATGATGACCCTAGCAACTCTGATATCTTGTTCAGAGAGTATTGCATTAACCTCCAAGAAGGTGAGAAGCTCAACATAACCTTCATTCCTAGCACCACAGATTCCTACGCTTTCATCAACGGGATCGAGATTGTTTCGATGCCCCCTTATCTCTACTACACCGATCCTGATGACAACTCATCGGAGCAGCCTCAATATGTTGGCACCACGACCCCATATGTCATCGAGAACAAGTTTGCTCTCCAGACCATGTACAGGTTAAAAGCTGGTGACCATACAATCTCCTCCTCTGAGGACACTGGTATGCTCAGGACTTGGGATACCGATAGCAAGTACCTAGATACTCCAAGTGCAGAATCTTATGAGTTTACGGCTACAACTAAGCTGAGCTTCACTAAGAAGACTCCTAACTACACGGCACCAGACCAAGTGTTCCAATCTGTAAGGAATATGGGAATGAATGGCTCTAACAACATCAAGAACAACATCACTTGGCACTTTACCGTTGATTCCGGCTTCACCTACTTGCTAAGGTTATACTTTTGTGAGCTTAACCCCAGAATTGACGACGCTGGTTTACTGAGATTCATCATCTTCATACAAGACCAGTTGGCTACCGATTGGGCAGACGTTTTCTTGTGGACCAAAAATTGGGGTGTGCCCGTGGTTAGAGAGTATGTAGTTATCATGCCAGAGAATCAGAAAAAAGTTAACCTTTCACTAAAAATGCATCCTCACCCTAGAAGCGTGATCTCGGACATACAAATAAATGCAATTGAAATCTTCAAAATCAGCAATAATAAAGATAGTCTTGCTGGACCAAATCCCGACCCTTCTACACAAACCGCAGTGGTTAACCATCAAGACTCAAACAAGAAAAGTCGAGCCTCCAAGAAAACTCTTGGCGCCGTGACGGGGTCAGTTTTCGGCGTCCTTTTGCTCACTTTATTTATTGTCGCTTTCTTCCTCGTCAAACGCAAGAAGAACATCGCCGTTGAAAGTAAAAAGCACAGAACTTCTCGCGGGGATGGCTCATCATCGCTACCAACCAACCTCTGCCGTCATTTCTCAATCGCAGAAATCAGGGCCGCCACAAATAACTTCGACAAACTCTTCGTCGTTGGAGTGGGAGGCTTCGGCGACGTGTACAAAGGCTATATCGAAGACGGCTCAATACCTGTCGCAATCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTCTGAACGAGTTCGTGAACGAGATCGAAATGCTCTCTCAACTTCGTCATCTCCATCTTGTTTCCCTTATCGGTTATTGCTACGAAAGCAACGAGATGATACTCGTTTACGATTTCATGGATCATGGAACCCTCCGTGATCATCTCTACGGAGCCGATAACCCTCCGCTCTCATGGAATCAAAGGCTTCAGATATGCGTAGGTGCTGCACGAGGACTGCACTATCTGCATACGGGTGCGAAACAGATGATCATTCACCGCGACGTGAAGAGCACAAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTCGGGTTATCTCGAATTGGGCCCACGGGTCCTTCAATGACCCATGTGAGCACTCAGGTGAAGGGCAGTGTAGGGTATTTAGACCCGGAATATTACAAACGGCAGCGTTTGACGGAGAAGTCGGACGTGTACTCGTATGGCGTGGTGCTGTTGGAGGTACTGTGTGGGAGGCAGCCTTTGCTCCGAATGGTAGAGAAGCCACAGGTGTCACTTGTGGATTGGGCGAAGCATTGGTATGAGAAGGGGTCTCTGGGTGAGATTGTGGATCCAGCACTGAAGGGGCAGATAGCACCTCAGTGTTTGCGCAAATTTGGTGAGGTTGCGGTGAGCTGTTTGCTTGAGGATGGGACTCAGCGACCTTCTATGAACGACGTGGTTGGGGTGTTGGAGTTTGTTCTGCAGCTTCAGCTTCAGGATAGTGCCAATGTGAATGCTGTGTTGGAAAGTGGTGGGGATTATGAAGACAGTGGTACTGAGAACATGTTTAGCAGTAGCCATAGTAGTGTGCATGTTTCCGACTATAGTAATAGCAGTGGACTGAACACTGCAAGCTACGGGAGGAAGGAATCTGACAGTTTACTCCCAGAGCTTGTGTTCTCTGAGATTAAGGATCCGAAGGGACGCTGA 2601 0.4756 MDTTYRQSASGTILLLLQFWCFSFLSIAEDIYDPTELFSISCGSSTNFSTLDRNWTADIHFLSPSSHLSFAARPLTPCTEQGPYTHARLSHSPFTYSFHLTPGPKFIRLFFYSTSYQNFNRPQACFSVKAGPYTLLQGFNASLNADADDDPSNSDILFREYCINLQEGEKLNITFIPSTTDSYAFINGIEIVSMPPYLYYTDPDDNSSEQPQYVGTTTPYVIENKFALQTMYRLKAGDHTISSSEDTGMLRTWDTDSKYLDTPSAESYEFTATTKLSFTKKTPNYTAPDQVFQSVRNMGMNGSNNIKNNITWHFTVDSGFTYLLRLYFCELNPRIDDAGLLRFIIFIQDQLATDWADVFLWTKNWGVPVVREYVVIMPENQKKVNLSLKMHPHPRSVISDIQINAIEIFKISNNKDSLAGPNPDPSTQTAVVNHQDSNKKSRASKKTLGAVTGSVFGVLLLTLFIVAFFLVKRKKNIAVESKKHRTSRGDGSSSLPTNLCRHFSIAEIRAATNNFDKLFVVGVGGFGDVYKGYIEDGSIPVAIKRLKPGSQQGLNEFVNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDHGTLRDHLYGADNPPLSWNQRLQICVGAARGLHYLHTGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGPSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMVEKPQVSLVDWAKHWYEKGSLGEIVDPALKGQIAPQCLRKFGEVAVSCLLEDGTQRPSMNDVVGVLEFVLQLQLQDSANVNAVLESGGDYEDSGTENMFSSSHSSVHVSDYSNSSGLNTASYGRKESDSLLPELVFSEIKDPKGR 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02942 866 MobiDBLite consensus disorder prediction 419 437 - -
Phco3g02942 866 FunFam receptor-like protein kinase FERONIA 477 591 - -
Phco3g02942 866 FunFam Receptor-like protein kinase FERONIA 592 807 - -
Phco3g02942 866 MobiDBLite consensus disorder prediction 419 444 - -
Phco3g02942 866 MobiDBLite consensus disorder prediction 814 844 - -
Phco3g02942 866 CDD STKc_IRAK 530 788 - -
Phco3g02942 866 Gene3D Transferase(Phosphotransferase) domain 1 592 807 - -
Phco3g02942 866 ProSitePatterns Protein kinases ATP-binding region signature. 521 544 IPR017441 GO:0005524
Phco3g02942 866 Gene3D Phosphorylase Kinase; domain 1 474 591 - -
Phco3g02942 866 Gene3D - 35 194 - -
Phco3g02942 866 Gene3D - 226 413 - -
Phco3g02942 866 SUPERFAMILY Protein kinase-like (PK-like) 490 790 IPR011009 -
Phco3g02942 866 PANTHER OS03G0124300 PROTEIN-RELATED 14 477 IPR046957 GO:0004672
Phco3g02942 866 FunFam FERONIA receptor-like kinase 37 195 - -
Phco3g02942 866 Pfam Protein tyrosine and serine/threonine kinase 521 785 IPR001245 GO:0004672|GO:0006468
Phco3g02942 866 Pfam Malectin-like domain 40 411 IPR024788 -
Phco3g02942 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Phco3g02942 866 MobiDBLite consensus disorder prediction 812 844 - -
Phco3g02942 866 SMART serkin_6 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02942 866 ProSiteProfiles Protein kinase domain profile. 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02942 866 FunFam FERONIA receptor-like kinase 226 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02942 Phco-Chr3 55822110 55824710 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco3g02942 Malectin_like 3.7e-36 CL0202