Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02939 ATGGGTCTTCTTTCACTTTTGTCATGCTTCTCTAACCCTGAGCCAGGGGGAAACAGATTACTCATGACAACAACCTTCAACATCATGGAAGAACCTTGCCACCACTTTTCACTTGCAGAGATACAGTCATCACTAGCGAGTGTTAACGAATCTTTGGTGATTGGAGAAGACTCATTCGGGGTAGTGTACAAGGGTTATCTGAAAAAAGGTGATACCACTGTTGCAATAAAGTGGTTCAAAAAGGGTTCTCTTTCTGGTCTCTCAGAATCACAGTTGAAGAACGAGGTTCTCTTTCTTTGTCAACTCCACCACCCCAACATCATTCCTTTAATTGGATTTTGCATTGGAAGAGACCCCCATCTGATTCTTGTACATGAATACATGCTTAACGCTTCACTCAGTGATCACCTTCATTATAGAAACAATCACAAAGGAGTTCCACTTTCGTGGAAAAGGAGGCTTCAAATTTGCATAGGTGTGGCACGTGGATTGCATTATCTACACACAGGAGGCAGGTGTTCTGTGATACACAGTTTTTTGAAAACACAATACATCCTTTTGGATCAAAACTGGGAGCCTAAAATATCTGGTTTATTGTTGTCCAAAAGGGGAGCTGTTGATGTTGTAAGGTCATCTCTTGTTGTGAGAAACCATGATACTTTCGCATATTGTGATCCTGAGCATGCAGCATCTGGCATCTTGACTGCAAAATCAAATGTGTTTTCATTTGGGGTGGTTCTATTGGAAGTTGTGAGTGCAAAGCAAGCGCTAGATTTGTACTTGGAACGTGTGAACAACCCGAATTATTCAGTGGAGTTACATGCAGAAAAGATAGTCGACCCGTTTCTTAAGTCCAAAATTGCTCCAGATTGTTGGAAAACGTTCATTGAGATTACTGAGAGGTGCTTGCATAAACAAGGAACGGAACGACCAAACATGGGCGAAGTGGAGATGCAACTCGAGTTTGCGCTTCAATTGCAGGAGAAAGCAGAAACCTAG 999 0.4204 MGLLSLLSCFSNPEPGGNRLLMTTTFNIMEEPCHHFSLAEIQSSLASVNESLVIGEDSFGVVYKGYLKKGDTTVAIKWFKKGSLSGLSESQLKNEVLFLCQLHHPNIIPLIGFCIGRDPHLILVHEYMLNASLSDHLHYRNNHKGVPLSWKRRLQICIGVARGLHYLHTGGRCSVIHSFLKTQYILLDQNWEPKISGLLLSKRGAVDVVRSSLVVRNHDTFAYCDPEHAASGILTAKSNVFSFGVVLLEVVSAKQALDLYLERVNNPNYSVELHAEKIVDPFLKSKIAPDCWKTFIEITERCLHKQGTERPNMGEVEMQLEFALQLQEKAET 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02939 332 PIRSF ILK 27 331 - -
Phco3g02939 332 SUPERFAMILY Protein kinase-like (PK-like) 29 326 IPR011009 -
Phco3g02939 332 Gene3D Phosphorylase Kinase; domain 1 18 127 - -
Phco3g02939 332 PANTHER OS07G0166700 PROTEIN 33 327 IPR045272 GO:0004714|GO:0006468
Phco3g02939 332 ProSiteProfiles Protein kinase domain profile. 48 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02939 332 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Phco3g02939 332 Pfam Protein tyrosine and serine/threonine kinase 53 320 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02939 Phco-Chr3 55803256 55804254 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco3g02939 PK_Tyr_Ser-Thr 1.6e-35 CL0016