Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02932 ATGGTACCCTGGAACAGAATTTTGACAAGCATAAAGTGGAAGGACAAAACTCTGCACCTAGCTACGAACAATGAGATACATAAAATCATGATTAAGAGCCCAAGAGAAGCCGATTTTCCTTTAAAACAGGAGGGTAGTCATTCTCAATCAATTAGTGATCCTGAAAAGGCAAAGGCTTCATCAAGCTCAGCAGCACAATGGCCAAGATTGAAGGATCCAAGGATTGTTCGAGTATCTAGAGCCTTTGGAGGAAAAGACAGGCATAGCAAGGTTTGCACAATAAGAGGGTTAAGAGACAGACGAGTGAGATTATCAGTACCAACTGCAATCCAACTCTATGATCTTCAAGATAGGTTAGGGCTCAGTCAACCTAGCAAGGTTGTTGACTGGTTGCTCAATGCAGCTAAGCATGAAATTGACGAACTTCCGCCACTGCCAATTGTTCCTTCAGTGAATAACTTCACCCTTGGTTATCCATCTGCTGTTACTTCTAATGAAGCTACAACCCCTCACTCTCAGCCTAATGAACAACTTCTTAATATAAATAGTAGCATTCAGTGGCAAGGGACAAACCAAAGTTCTGCATGGAAATCAAAGCGTAAAGAAATTTCAGGAGAAATGATCAGCATTGACAAAGCAAATTGGATAAATAGAAGTGAAGAGGATAAGCAAGAAAGCAATACTGAAGGTCCTAGCACACATGTTATGCCAAATAATCTCTTACCAAGGGTAAACCATCCTTCATTCTTGGGCCTGCTAAATACTATGCCACATGGTTACCAGTGGGAACCTTCCGCTGGTGATGTTTCTCATCAGTTGGCAAACAATGGATTTTCAAACCAAACAGACATACACAGCATTAGCGTTGTACCTTTCCCGACATCAACGCTGTCTTTATCATCAGGGAATTCTCAAATTCTGTTATGTCCTCCAGGAGCAGCACAGTCATATTTCCCTTCACATTTTGCAGCAATGGACATGGATCAGAGGCAAATCAACCACTATCAGATGTTGAGTTCAGGTCCTCAAAACCCATCGGCGAATTCTCTCAATCATTCTTTTGGCTTGGCTGTGATGTCTCATAAACCTCTCCATTCACCCAACTGCAGCAAAAGCCCATCCCACAAAGACCAAGATTTCCCTTCCAAGTGA 1152 0.4219 MVPWNRILTSIKWKDKTLHLATNNEIHKIMIKSPREADFPLKQEGSHSQSISDPEKAKASSSSAAQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIVPSVNNFTLGYPSAVTSNEATTPHSQPNEQLLNINSSIQWQGTNQSSAWKSKRKEISGEMISIDKANWINRSEEDKQESNTEGPSTHVMPNNLLPRVNHPSFLGLLNTMPHGYQWEPSAGDVSHQLANNGFSNQTDIHSISVVPFPTSTLSLSSGNSQILLCPPGAAQSYFPSHFAAMDMDQRQINHYQMLSSGPQNPSANSLNHSFGLAVMSHKPLHSPNCSKSPSHKDQDFPSK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02932 383 Pfam TCP family transcription factor 84 226 IPR017887 -
Phco3g02932 383 MobiDBLite consensus disorder prediction 40 68 - -
Phco3g02932 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 42 338 IPR005333 GO:0003700
Phco3g02932 383 MobiDBLite consensus disorder prediction 216 239 - -
Phco3g02932 383 ProSiteProfiles TCP domain profile. 84 142 IPR017887 -
Phco3g02932 383 MobiDBLite consensus disorder prediction 364 383 - -
Phco3g02932 383 MobiDBLite consensus disorder prediction 43 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02932 Phco-Chr3 55734781 55735932 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco3g02932 TCP 1e-27 No_clan