Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02922 ATGCCACAAGCTCGAGACAAAGACAACACTCACAGCAACCATCATTACATTTCTTCAACACCCACAACAATAGCACAATCTCCAATGAACAATTTGCCGCGAGATCTGTTGAGAAGCTTCATGGGAGTGAACAATCATCACAGCCACCATGGTAATCATCAGAATTTGCCTGTGCCCGTGGTGAAGTTAGAGGAAGAAGAGGACTTGGAGCTAAGTCTCGGACTTTCGATGAACGGTCGATTTGGGGTGGACCCCACCGCGAAGAAGATAAAGAGAACGACGTCGATTCCGGAGTTTGTGAGGGACGAGGAGATGGGGTACGCTGCCGTGGGGTGCACGGGGCCTCTGGTGAGGACCTGCTCGCTGCCGACGGAGACGGAGGAGGAGTGGCGGAAGAGGAAGGAGTTGCAGACCCTGCGCCGCATGGAGGCAAGGAGGAAGCGCTCCGAGAAGCAGAGGAATTTGAAGGCTCTCAGAGAACAACAACAACAACAACAGAGGGCTGGGTCTGAAGGGAATAATCCTGTGGATCAAGGTGCAGGGGCTTACCCCGAGGGTGCACCCTTGGGGAGAACGGTGTCGTTGACCACACGCGTTTGTGGACTCGGTTTGAATGGGGACAGTGAGAAAGAGAAGAAGGAGAAGGGTGGAGTAGTGTTGGCGCCTCCATCGCCTTCGCAGGGTTCCATTGGTTCTTCGGGAACCTCAGAAGTCGAGTCTCAACAAGGTCAAGGACCAACACCAATGGATGTTAGAAGCCCCACTAGTGCCAACTTGTTGCCAGACAGTGAGCTGAAATCACCAATTGCCGCCCAAGCAAGTGTTGCAGAGAACGCAGGCAAGAATGCTGCTGCAGTGGCTATGAGAAGTCAATCTAACAAACATTCACCACCCCAGAACAGAACCAAAGACATTGTGAGGAACCTGTTGGAGGACATGCCCTGTGTCTCCACAAAAGGTGATGGTCCTAATGGAAGAAGAGTAGAAGGTTTTCTTTACCGGTATGGGAAAGGTGAGGAGGTGAGGATAGTGTGTGTTTGTCATGGCAATTTTCTCACCCCTTCAGAGTTTGTTAAGCATGCTGGTGGCGGTGACGTGGCAAACCCATTGAAGCATATTGTTGTTAGTCCAAGCATTTTGTGA 1143 0.5153 MPQARDKDNTHSNHHYISSTPTTIAQSPMNNLPRDLLRSFMGVNNHHSHHGNHQNLPVPVVKLEEEEDLELSLGLSMNGRFGVDPTAKKIKRTTSIPEFVRDEEMGYAAVGCTGPLVRTCSLPTETEEEWRKRKELQTLRRMEARRKRSEKQRNLKALREQQQQQQRAGSEGNNPVDQGAGAYPEGAPLGRTVSLTTRVCGLGLNGDSEKEKKEKGGVVLAPPSPSQGSIGSSGTSEVESQQGQGPTPMDVRSPTSANLLPDSELKSPIAAQASVAENAGKNAAAVAMRSQSNKHSPPQNRTKDIVRNLLEDMPCVSTKGDGPNGRRVEGFLYRYGKGEEVRIVCVCHGNFLTPSEFVKHAGGGDVANPLKHIVVSPSIL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02922 380 Pfam Tify domain binding domain 341 375 IPR032308 -
Phco3g02922 380 MobiDBLite consensus disorder prediction 282 301 - -
Phco3g02922 380 MobiDBLite consensus disorder prediction 285 301 - -
Phco3g02922 380 PANTHER AFP HOMOLOG 2 33 378 IPR031307 GO:0007165
Phco3g02922 380 MobiDBLite consensus disorder prediction 14 30 - -
Phco3g02922 380 MobiDBLite consensus disorder prediction 141 157 - -
Phco3g02922 380 MobiDBLite consensus disorder prediction 225 261 - -
Phco3g02922 380 Pfam Putative nuclear localisation signal 116 170 IPR032310 -
Phco3g02922 380 MobiDBLite consensus disorder prediction 141 190 - -
Phco3g02922 380 Pfam Ethylene-responsive binding factor-associated repression 64 98 IPR012463 -
Phco3g02922 380 MobiDBLite consensus disorder prediction 158 173 - -
Phco3g02922 380 Coils Coil 132 168 - -
Phco3g02922 380 MobiDBLite consensus disorder prediction 1 30 - -
Phco3g02922 380 MobiDBLite consensus disorder prediction 203 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02922 Phco-Chr3 55633408 55636671 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02922 3 55633408 55636671 Phco3g02922 3 55633408 55636671 ECH