Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02872 ATGTCGGAGGCAAAAGACCCGACGATCAAGCTCTTCGGGAAGACGATCCCGTTGTCAGAGATTGCGACTGGATCCGCCGGAGCTCCGGCTTCGTCATCCGGTGACGTTGTTGATGAAAGTGTTGAACAGAGCCATGCTTCTTCCTCCAACTCCTCGAGGGAGTCTCATACGCGAGAGGAAGGTGTTGTTGACAAGGACTCACAGGGAGAAAAACCAGCTGATAATAAGAAGGAAGATAGAGCCCCATCCCAATCATTAGAAGAGGTCAACAATCCAGATACTGCCTCTGGAACCTGTGAAGAATCCATTACTCTACCCATTGACAAGGAGACCACTACTTTAAGAACTTCAAAAACTGAAGAAGAACTAAGTGAGACAAGTAAATCACAGGATAAGAACCTCAAAAAACCAGACAAAATACTTCCTTGTCCTCGCTGTAATAGTATGGACACAAAGTTCTGCTACTATAATAATTACAATGTCAACCAACCCCGTCACTTCTGCAAGAATTGCCAGAGATACTGGACTGCTGGGGGGACTATGAGGAATGTTCCTGTAGGTGCTGGTCGCAGGAAGAACAAGAGCTCAACTTCTCACTACCGCCAGATAACTGTTCCTGATGCTGCTCTCCAGAATCCTCAAATTGACTTGCCAAATGGAGCGTATCATCCTTCCTTGAAATGCAATGGGGCAGTCCTTACATTTGGATCTGATACACCCTTGTGTGAATCAATGACATCGGTTTTGAACCTTGCTGATAAAACCGTGCACAACTATGCAAGAAATGAATTTCATAAACCCGAAGAACTAAAAATTCCTGTTCCAAATGCCAGTGGAGAAAAAAGGGATGATCAATCCAATAAATCTTCAGTTACCTCCACAAAGTCAGTGGAAGGTGCAAGCACCGATGGAGCCCAAGAACAAGCTATGCCGAACTGTCATTCTTTCCCACCACAGGTTCCCTACTTTACTGGTAACTCTTGGCCTATTCCATGGAATCCAGTGCAATGGAGTTCTCCAGTACCGCCGCCTGCCTTTTGTCACCCTGGATTCACCGTACCATTCTATCCCGCAGCAGCTTATTGGGGTTGTGCTGTGTCTGGTGCTTGGAACATCCCATGGATGGCACAACCGTCCTCACCGAAGGGTGCAACTTCTAACTCTGGCCCTAACTCACCGACCTTGGGTAAACATTCAAGGGAAGACAACATTCTGAAATCACATGAATCTGGTGGTGGTGAGGATGGACATAACAAAGAAAACAACAAAGAGAAGTGCCTGTGGGTTCCAAAAACTCTAAGGATTGATGACTCGGGAGACGCAGCAAAAAGCACTATATGGACAACACTGGGGATTAGGAATGACAAGGTTGACTCAGTTCCTAGGGAAACACTCTTCAAAGGCTTCCCTTCAAAGCTTGATGAGAAAAACCATTCAATGCAAGCCTCGCCAGTGTTGCAGGCCAATCCGGCTGCGTTGTCAAGGTCACTTAACTTTCATGAGACCTCATAG 1512 0.463 MSEAKDPTIKLFGKTIPLSEIATGSAGAPASSSGDVVDESVEQSHASSSNSSRESHTREEGVVDKDSQGEKPADNKKEDRAPSQSLEEVNNPDTASGTCEESITLPIDKETTTLRTSKTEEELSETSKSQDKNLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSTSHYRQITVPDAALQNPQIDLPNGAYHPSLKCNGAVLTFGSDTPLCESMTSVLNLADKTVHNYARNEFHKPEELKIPVPNASGEKRDDQSNKSSVTSTKSVEGASTDGAQEQAMPNCHSFPPQVPYFTGNSWPIPWNPVQWSSPVPPPAFCHPGFTVPFYPAAAYWGCAVSGAWNIPWMAQPSSPKGATSNSGPNSPTLGKHSREDNILKSHESGGGEDGHNKENNKEKCLWVPKTLRIDDSGDAAKSTIWTTLGIRNDKVDSVPRETLFKGFPSKLDEKNHSMQASPVLQANPAALSRSLNFHETS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02872 503 MobiDBLite consensus disorder prediction 25 51 - -
Phco3g02872 503 MobiDBLite consensus disorder prediction 289 312 - -
Phco3g02872 503 MobiDBLite consensus disorder prediction 378 423 - -
Phco3g02872 503 MobiDBLite consensus disorder prediction 378 398 - -
Phco3g02872 503 MobiDBLite consensus disorder prediction 52 84 - -
Phco3g02872 503 MobiDBLite consensus disorder prediction 113 139 - -
Phco3g02872 503 MobiDBLite consensus disorder prediction 267 312 - -
Phco3g02872 503 Pfam Dof domain, zinc finger 138 195 IPR003851 GO:0003677|GO:0006355
Phco3g02872 503 MobiDBLite consensus disorder prediction 1 139 - -
Phco3g02872 503 ProSitePatterns Zinc finger Dof-type signature. 143 179 IPR003851 GO:0003677|GO:0006355
Phco3g02872 503 MobiDBLite consensus disorder prediction 267 288 - -
Phco3g02872 503 MobiDBLite consensus disorder prediction 399 423 - -
Phco3g02872 503 ProSiteProfiles Zinc finger Dof-type profile. 141 195 IPR003851 GO:0003677|GO:0006355
Phco3g02872 503 MobiDBLite consensus disorder prediction 85 112 - -
Phco3g02872 503 PANTHER CYCLIC DOF FACTOR 2 1 503 IPR045174 GO:0003700|GO:0006355
Phco3g02872 503 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02872 Phco-Chr3 55145155 55148214 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco3g02872 zf-Dof 2.1e-32 No_clan