Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02863 ATGAGTTCTAGGGCTTTACATGGTGTTCTTAGCAATCATAGGAAAGGAAACTCTACACAATTGGTAAGAAAATTTGTAACCCCTCAAAACCCAAAACCTTTGTTGTTTTCTGTTCTTGCAACTAAGACATTAGTGCTTCCTTCTTTAACAGACTGGGGATTTTGGTGTGGGATTGGATCAATGGAGAACGTTTGCAAAACAAGTAAGGAAAATCAGCAGTTGAAGTTGCCAACAGGTTTTAGATTTCACCCAACAGATGAAGAACTCATAAAACACTACCTCACAAAGAAGGTTGTTGACAACTGTTTCTGTGCTGTGGCCATTGGTGAGGCTGATTTGAACAAGTGTGAGCCATGGAATCTGCCTGGATTGGCTAAAATGGGTGAAACTGAGTGGTATTATTTCTGTGTGAGGGACAAAAAGTACCCAACTGGTTTAAGGGCTAATAGGGCTACTGATGCTGGTTATTGGAAAGCCACAGGGAAAGACAGGGAGATAATAGCGGAAAATGCACTCATTGGGATGAAGAAAACCTTAGTTTTCTACAAGGGAAGAGCTCCAAGAGGTGAAAAGACAAACTGGGTTATGCATGAATATAGGTTGGAAGGGAAACAGAATCAAAACAAATCTGCAAAGAGCGAATGGGTGGTGTGCAGAGTCTTTGAGAAGGGTCCCTGTGGAAAGAAATCGCATGTTCCAAATTTTGGGAGGTTCAATTCCTCTGGAAACGAATCATCATCACCTTCTGCTCAATTGCCTCCTTTGATGGATTCTCCTCCAGACAACAGTGAAACAATAACCACTGCTGGTGAGTTGTCTCAGGTGACCAGCTGTGGTCCAAATCAAACTATGGATCGGAACACACATGATGACATTGTTCATAGCTTGGAAACTCCTGTATTGGACTTTTCATCCTCTGCAACTCCTTACGATGTTTTCCCTTTAGGCAAAGCAACCCTTTCAGCCATAAACCAACCAACCCAGATTGCACACCAAATTGGGGACTCACAGTGCCCAGATTATTGTTATATGCCTCAAGAACAGTCCTTGAGGATGCTGATGGGAAACCATGAATCAAGTGCAAAGCAAATTCAGAAAGCAGAGTTTTCTGAGGGAAGAGACTTTGGTGCTGATGATATCTCATCTGTGTTATACAACAGTGACATGATACAAAAAATGTTTGAGAATCAAGAACATTCATCAGCTTCTGCAGGACATGTGGCCACTGATTGCATGTGGAATTACTGA 1248 0.4207 MSSRALHGVLSNHRKGNSTQLVRKFVTPQNPKPLLFSVLATKTLVLPSLTDWGFWCGIGSMENVCKTSKENQQLKLPTGFRFHPTDEELIKHYLTKKVVDNCFCAVAIGEADLNKCEPWNLPGLAKMGETEWYYFCVRDKKYPTGLRANRATDAGYWKATGKDREIIAENALIGMKKTLVFYKGRAPRGEKTNWVMHEYRLEGKQNQNKSAKSEWVVCRVFEKGPCGKKSHVPNFGRFNSSGNESSSPSAQLPPLMDSPPDNSETITTAGELSQVTSCGPNQTMDRNTHDDIVHSLETPVLDFSSSATPYDVFPLGKATLSAINQPTQIAHQIGDSQCPDYCYMPQEQSLRMLMGNHESSAKQIQKAEFSEGRDFGADDISSVLYNSDMIQKMFENQEHSSASAGHVATDCMWNY 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02863 415 ProSiteProfiles NAC domain profile. 76 223 IPR003441 GO:0003677|GO:0006355
Phco3g02863 415 MobiDBLite consensus disorder prediction 234 266 - -
Phco3g02863 415 SUPERFAMILY NAC domain 72 223 IPR036093 GO:0003677|GO:0006355
Phco3g02863 415 FunFam NAC domain-containing protein 100-like 85 226 - -
Phco3g02863 415 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 73 324 - -
Phco3g02863 415 MobiDBLite consensus disorder prediction 232 266 - -
Phco3g02863 415 Pfam No apical meristem (NAM) protein 77 201 IPR003441 GO:0003677|GO:0006355
Phco3g02863 415 Gene3D NAC domain 85 225 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02863 Phco-Chr3 55071841 55074279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco3g02863 NAM 7.6e-38 No_clan