Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02803 ATGGAAAGCCAGTCAATGGCAGTGGACAGTGGAGCAATAGTTTACAATCATGCAGCGTATGGACCGCGTAATAAGGCTACACCATTGACAAATATTCAGAGGTCTCACTCGCCGCCATGGCTAATAACTGAGATTGAGGGTATTCTACTAGCTAGAGAAATAGTAATATTGAAGCAAAAAATGTCTAACCCTGGTAGTCCAAAGATAGAAGAGAAGAGAATTACAAAGGAAGATAAAGTCAAATCTGCTAAAACTGAGATGGGTGAGGTGAAGGAAGAAAATGAGAGATTGAAGAAGACGCTGGAAAGAGTAGAAAAGGATTACCACTCCCTTCAACTCCGTTTCTTTGACATCCTTCACAAAGATGTTTCAAAGAAGGGTGTGGTTGATTCATCTACTTCCCATGAAGACCAAAGTGAAGAGCCTGAGTTTGTCTCACTTTGCCTTGGAAGGACTCCAACGGAGCCTAAGAAGGAGGCAATAATTGGAAACTCCGACAAAGTAACAGAAAAAGAGGTTGGACCCAACCTTACTCTTGGATTAGACTCCAAACACCTGTTGGAGATGGAAGTTGTGTCTGATTTGAGTCCAATGAACAGCTCAGAAGAACCAAAGGAAATGGAAACAGAGGGAACATTGTCAACAAATCAATCAGCAAAAGTGATAAATGTAAATACTGACAGTTCAGATCAAATGCCAGCCAAGAGAGCAAGGGTATCTGTGAGAGCTAGATGTGATACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAGGGAAATCCATGTCCGAGGGCATACTATCGTTGCACAGTTGCACCAACATGCCCAGTTAGGAAGCAGGTGCAAAGGTGTTCCGAGGACCTGTCCATCTTAATCACCACCTATGAAGGAACCCACAACCACAAACTTCCAGTCTCAGCCACAGCCATGGCTTCAACCACTTCTGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCAACATCACACCTTTCAAGCCACATTTCTGCATCTTTTGGAAATGCTCCTACCACACTACTCAATGGTCTAAGTTTCAGTGACCAGTTTCATGAATCAAGAGCCAAACAAATCTTCTCACCACCAAACCATGCCTCATCACATACGTTCTCAACAATCACTCTAGACCTGACTTCTTCGGCTCCTTCCTCCTCATCAACTCAATTCCACCATGGCTTACCTTCAACCATGGTTTCAATTTCAAACCCAAGATCCTCAGCAGGTCTCAGCTTTTGTTCACCGGAGCATAACTTCATACCATCCATTTGGGGTAAGGGGTTCCATGATAATGGCACAACCACAGTACCAATTGACAAAGTCCCCACAAGGCCAATTATGCAGCCAAATAATTTCCTACAACATTTCTACGAACAACGCATAACAAGCCAAACTCCCTCCAAAGAAGCTTTGGCAGAAACAATAACCAAAGCAATCAGCACAGACCCGAGTTTTCGTTCAGTAATAGCTGCTGCAGTTTCATCAATAGTGGAACATGGATCAAACAGTGGTAAACAAGAGGTATCAGAGAACATTATTCTTGGTTCAGGGTTGAACTTGAAACTTGGGGAGCATCATCAATCGGCTTCACCCAGTCCCTTGAACCAGAACGGGAAAGGATGCTTAACAGGCTACTTCAAAAGTTTGTCCTCTAAGGGTTCTGAGGCTGGAAACGTCCTTCTTCTCCAACCATCATTGCCATTTTCTTTCTCCAAGAGTGTCACAAATCAGATCAACTGCTATGTTCCAGAAATGAACAGGCATCATTAG 1803 0.4348 MESQSMAVDSGAIVYNHAAYGPRNKATPLTNIQRSHSPPWLITEIEGILLAREIVILKQKMSNPGSPKIEEKRITKEDKVKSAKTEMGEVKEENERLKKTLERVEKDYHSLQLRFFDILHKDVSKKGVVDSSTSHEDQSEEPEFVSLCLGRTPTEPKKEAIIGNSDKVTEKEVGPNLTLGLDSKHLLEMEVVSDLSPMNSSEEPKEMETEGTLSTNQSAKVINVNTDSSDQMPAKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPTCPVRKQVQRCSEDLSILITTYEGTHNHKLPVSATAMASTTSAAASMLLSGSSTSHLSSHISASFGNAPTTLLNGLSFSDQFHESRAKQIFSPPNHASSHTFSTITLDLTSSAPSSSSTQFHHGLPSTMVSISNPRSSAGLSFCSPEHNFIPSIWGKGFHDNGTTTVPIDKVPTRPIMQPNNFLQHFYEQRITSQTPSKEALAETITKAISTDPSFRSVIAAAVSSIVEHGSNSGKQEVSENIILGSGLNLKLGEHHQSASPSPLNQNGKGCLTGYFKSLSSKGSEAGNVLLLQPSLPFSFSKSVTNQINCYVPEMNRHH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02803 600 MobiDBLite consensus disorder prediction 194 214 - -
Phco3g02803 600 Coils Coil 80 114 - -
Phco3g02803 600 Gene3D WRKY domain 235 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g02803 600 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g02803 600 FunFam probable WRKY transcription factor 31 235 312 - -
Phco3g02803 600 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 68 514 IPR044810 GO:0003700
Phco3g02803 600 SUPERFAMILY WRKY DNA-binding domain 243 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g02803 600 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g02803 600 Pfam WRKY DNA -binding domain 251 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02803 Phco-Chr3 54444396 54447487 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco3g02803 WRKY 1.4e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02803 3 54444396 54447487 Phco3g02803 3 54444396 54447487 ECH
Phco3g02803 3 54444396 54447487 Phco8g01319 8 13740167 13743852 ECH
Phco3g02803 3 54444396 54447487 Phco7g02279 7 40160177 40163607 ECH