Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02780 ATGGAAGCAATGGAATTGGATTGGAAAAGGAGGGTTAACACAGTGAAAGGCACTGCACATGCTCTCTCATATCTTCATCATGATTGTGTCCCTCCAATAGTGCATAGAGACATATCAGCAAGCAACGTGTTGCTTAACTCCAACTGGGAGCCTACTGTTTCAGACTTTGGCACAGCTCGATTTCTCAATCTTGATTCATCCAATCAAACTATAGTTGCTGGAACCATTGGGTACATAGCTCCAGAGCTTGCGTATACAATGGTTGTGAATGAAAAGTGTGATGTGTATAGCTTCGGAGTGGTGGCGCTAGAAACCTTAATGGGAAAACATCCTAAGGATATACTCTCATCACTTCAATCAACTTCTACAGGTGATGACGTCAAATTATGTGAAATATTGGACCAACGCCTCCCACACCCAACATTTTCAGTTTTACAAGACATAGTTGTCATTGCCATTGTGACTTTTGCGTGCTTAAATCCCAATCCTTGCTCTCGCCCAACAATGAAAAGCATTTCTCATTGTTTTCTTAGTCAGTTCACACCATTCAACATTTCTTTATTTCATATTTCATTGCAGCAACTCATAAGTCAAGAACTCACCCACTACTTGAAATTGTGA 621 0.4058 MEAMELDWKRRVNTVKGTAHALSYLHHDCVPPIVHRDISASNVLLNSNWEPTVSDFGTARFLNLDSSNQTIVAGTIGYIAPELAYTMVVNEKCDVYSFGVVALETLMGKHPKDILSSLQSTSTGDDVKLCEILDQRLPHPTFSVLQDIVVIAIVTFACLNPNPCSRPTMKSISHCFLSQFTPFNISLFHISLQQLISQELTHYLKL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02780 206 Pfam Protein kinase domain 11 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02780 206 SUPERFAMILY Protein kinase-like (PK-like) 6 174 IPR011009 -
Phco3g02780 206 Gene3D Transferase(Phosphotransferase) domain 1 2 181 - -
Phco3g02780 206 FunFam MDIS1-interacting receptor like kinase 2 1 182 - -
Phco3g02780 206 PANTHER LEUCINE RICH REPEAT KINASE 2 2 179 - -
Phco3g02780 206 ProSitePatterns Tyrosine protein kinases specific active-site signature. 33 45 IPR008266 GO:0004672|GO:0006468
Phco3g02780 206 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02780 Phco-Chr3 54170627 54171410 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phco3g02780 Pkinase 7.7e-23 CL0016