Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02762 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTGGTTGAGGTATCTAATGCACACACTGCTGCAATAAGAGAAGCTGGTCAAAGACTAAATGCGCAGGATGTTTCTGGTTTGCGAGGGATTCCAGGAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGGCCCTATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTGTCAAATGCGCGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGGTCCTGTCAAGAGCCTCCCTCTCCTGTGCCTACAAGAACGTGGAAAGGAAAGAGCTCTTTACCAGAAGCTGTAGAACTTGTGCCTGATTTTCAGACATTGAATGGTAGCAATGATTCTTTTGGGGAAACTGGTCCAAGTTCATTTGCTGGTGCAAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTACCAATAGGTCAAACTAAATCTGAGGCAGCGTGCTTAATGAAGAGTGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACAAAGCATGGCTGTTGTTTCTCCTGCAGAAATCCTGGTTGATGAGTCAAATGAGATGCGTAACTTACCCTCGCCAGTTTCAGGTGCTCGTGCATCTCAGAATACTGACAACTCTCCTCCTGCTATAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTCAGTCCTCTTAGTAGTGTTGATAGTACTAGTGTTGTCAGAACAATGAGCATCGTTAATAGTTGTGCAAGTACATACCCGAGTGATGCAGTCACCAGTGATGGCATGCTTACTTTGGACAGGAATTGTGATAGCACCAAAGGAAGTGTAAGAGGGGATTCACTCGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGAAAGCAACTGGAGTAACATAACTGGTAGTGCAAATAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCTATCCTTGCCATCCGAGCACGGGATGGAATTCTGGGCATGAGTCACTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGGAGTGTATATCTCTCAGAGCTGAGTGCAACTCGATGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCTACTTTGTACACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCGGGGGGTGATCTTCACACCTTAAGGCAAAGACAACCTGGGAAACATTTCTCGGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTAGAATATCTTCACATGCTTGGAGTGGTGTACCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCAGATGTGCCGTTTCACCTACCCTTATCAGAAATATTGACGGTGATCCCTCCAAACGAGCTGGTGGTGCATTCTGTGTGCAACCGGCTTGCATTGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCTCGAATTTTTGCTCAGAAAAATAAGAAGTCACGGAGGCCTAGAGCTGATCCAGCCGTGCCATCCAGCACACTTCCCGAGCTTGTTGCAGAACCAACAACTGCTCGGTCGATGTCCTTTGTAGGCACTCACGAATATCTTGCCCCTGAAATAATCAAAGGAGAAGGTCACGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGGAAGACTCCTTTCAAAGGCTCAGGAAACCGTGCGACCCTGTTCAACGTGGTAGGCCAGCAGCTCAGATTTCCGGAGTCACCAGCCACCAGTTATGCCAGCCGTGATCTCATCCGTGGGCTGCTGGTGAAGGAGCCGCAGCACCGGCTGGGCGTGAAGAGGGGTGCAACAGAGATCAAACAGCACCCTTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACGCCACCAGAAGTTCCAAGAGCGGTTGAATGTGATGTAGCAGCAAAGTTTGAAGCAGTTGATAGTGTTGGGGTTGGCATGAAGAATAGTAGTAAGAGAATGGGAGGTAACAATGAGATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2286 0.4663 MERVAEPKVLPRSLPVLVEVSNAHTAAIREAGQRLNAQDVSGLRGIPGREGNQFSKSRDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSCQEPPSPVPTRTWKGKSSLPEAVELVPDFQTLNGSNDSFGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAACLMKSVSLKGPFLEDLSICVPAKKQSMAVVSPAEILVDESNEMRNLPSPVSGARASQNTDNSPPAIDSEEKECVWDASLPPSGNVSPLSSVDSTSVVRTMSIVNSCASTYPSDAVTSDGMLTLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDESNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNIDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRIFAQKNKKSRRPRADPAVPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRAVECDVAAKFEAVDSVGVGMKNSSKRMGGNNEMKSGGKYLDFEFF 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02762 761 MobiDBLite consensus disorder prediction 287 343 - -
Phco3g02762 761 Gene3D Transferase(Phosphotransferase) domain 1 594 716 - -
Phco3g02762 761 SMART serkin_6 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02762 761 Pfam Protein kinase domain 595 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02762 761 Pfam Protein kinase domain 367 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02762 761 MobiDBLite consensus disorder prediction 291 339 - -
Phco3g02762 761 Gene3D Transferase(Phosphotransferase) domain 1 450 517 - -
Phco3g02762 761 FunFam serine/threonine-protein kinase D6PK-like 593 716 - -
Phco3g02762 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Phco3g02762 761 FunFam serine/threonine-protein kinase D6PK-like 450 517 - -
Phco3g02762 761 SUPERFAMILY Protein kinase-like (PK-like) 348 716 IPR011009 -
Phco3g02762 761 Gene3D Phosphorylase Kinase; domain 1 364 449 - -
Phco3g02762 761 MobiDBLite consensus disorder prediction 41 60 - -
Phco3g02762 761 MobiDBLite consensus disorder prediction 214 233 - -
Phco3g02762 761 MobiDBLite consensus disorder prediction 214 238 - -
Phco3g02762 761 ProSiteProfiles Protein kinase domain profile. 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02762 761 FunFam Serine/threonine-protein kinase D6PK-like 364 449 - -
Phco3g02762 761 CDD STKc_phototropin_like 364 716 - -
Phco3g02762 761 MobiDBLite consensus disorder prediction 127 147 - -
Phco3g02762 761 PANTHER FLIPPASE KINASE 1-RELATED 140 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02762 Phco-Chr3 54027405 54030522 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phco3g02762 Pkinase 8e-37 CL0016