Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02745 ATGGAAGGAGAGAGAGGTGGTGCTCCCAATTATGAGCTTCAAGTTTCATTCACCAACACCTCACAAGCCATACACGAATTGGGTTTTATTCAGTATGAAGAAAACCAGGTCCTTGGCTTCTTATCACCCTCTTCACAATCTCAATCTTCTCACCTCTCTCAATCCTTAAATAGTGATGTAGTTGTTAATACTACCACTACAACTGCAGCAACCATCGGATTCATGAATCACAGTGAACTTGTCACCAAAACTTGGAATAACGACCAGGTAGGAACTCTGGATCCAAAGGCTGCCGATGAAGAAAACTGCACTGGAAATGCTAGTGAAGGCAACAACAACGTTTGGTGGAGGAGCGCAGCTACAGAGAAGAACAAGGTGAAGATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGAAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCGAGAAGTTATTACCGTTGCACCCACAACAACTGCAGGGTGAAGAAGAGGGTTGAACGACTCTCAGAGGATTGTCGTATGGTGATAACCACCTATGAAGGTAGACACAATCACTCTCCTTGCGAGGACTCAAATTCATCGGAGCATGAATGCTTTACCTCTTTCTAG 669 0.435 MEGERGGAPNYELQVSFTNTSQAIHELGFIQYEENQVLGFLSPSSQSQSSHLSQSLNSDVVVNTTTTTAATIGFMNHSELVTKTWNNDQVGTLDPKAADEENCTGNASEGNNNVWWRSAATEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCEDSNSSEHECFTSF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02745 222 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g02745 222 ProSiteProfiles WRKY domain profile. 143 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g02745 222 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 212 IPR044810 GO:0003700
Phco3g02745 222 FunFam WRKY transcription factor 57 134 208 - -
Phco3g02745 222 SUPERFAMILY WRKY DNA-binding domain 140 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g02745 222 Gene3D WRKY domain 134 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g02745 222 Pfam WRKY DNA -binding domain 149 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02745 Phco-Chr3 53836808 53844188 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco3g02745 WRKY 1.5e-24 CL0274