Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02731 ATGGCTTCCCCATCTTCCCCCACTGATTCCAACCCCCCCTCCGCCGTTCCCCTCCCTCTCCCCGCCCCTCCCTCCACCTCCTCCCGCCGCCTCCCCCCGCCCTGCTGGACCCCGGAGGAAACCGCCGCCCTCATCGACGCCTACCGCGACAAGTGGTACTCCCTCGGCCGCACCAACCTCAAAGCCACCCACTGGCAAGAGGTCGCCGACGCCGTCACCGCCCAGTGCCCCAACGCTTCCCCCACTGCCAAAACTGCCGTCCAGTGCCGCCACAAAATGGAAAAACTCCGCAAACGATACCGCACCGAAATCCAACGCCTCCGCTCCCTCCCCCTCCCTCGCCTCATCAACAACTCAACCACCGCTTCACCCTCCTCCTGGGTCCACTTCAAATCCATGGACTCCATGGAAAAAGGCCCCAACAAACCCCACACCGACACCACCACCGCCACCAACCCCAACACCCCCACCAACAACCTCAATTTCCCAGATGACGACAACGACGACGATCTGTACGAGGAATTCAAGAACGCCCCCGGATCCAACACGCGCAGCCTCAATAAACTCTACAAGAACGGTTTCGGATCCGGCTCCGGCTCCGGGTTCCGGATCCGGATACCGGCGGGGGTGCCAAACCACACTCCTTCGAAGTTCTTCAGCACGCCCCCTCCCGGCATGGTGCCGCGCAACGGCGGGAAAAGGGAGCGTGAGAGCGATGCGGTGGCCGAGATGGTGGGCGCGATAAAGGTGTTGCGCGACGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATTGAGAGCATGCGGATGGAGATGGAGATGAAGCGCACGGAGATGATCCTGGACTCTCAGCAGAGGATCGTGGAGGCTTTCGCCAGGGCCGTTTCGCAAAAGAGGAGCAAGGGCAAGTCCACGCCTTCTCCCTCATCGCAACCCTGA 951 0.6204 MASPSSPTDSNPPSAVPLPLPAPPSTSSRRLPPPCWTPEETAALIDAYRDKWYSLGRTNLKATHWQEVADAVTAQCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRSLPLPRLINNSTTASPSSWVHFKSMDSMEKGPNKPHTDTTTATNPNTPTNNLNFPDDDNDDDLYEEFKNAPGSNTRSLNKLYKNGFGSGSGSGFRIRIPAGVPNHTPSKFFSTPPPGMVPRNGGKRERESDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFARAVSQKRSKGKSTPSPSSQP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02731 316 Coils Coil 262 282 - -
Phco3g02731 316 Gene3D - 36 102 - -
Phco3g02731 316 Pfam Myb/SANT-like DNA-binding domain 34 136 IPR044822 -
Phco3g02731 316 MobiDBLite consensus disorder prediction 132 160 - -
Phco3g02731 316 MobiDBLite consensus disorder prediction 10 31 - -
Phco3g02731 316 FunFam Trihelix transcription factor ASIL2 36 102 - -
Phco3g02731 316 MobiDBLite consensus disorder prediction 213 235 - -
Phco3g02731 316 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 301 IPR044823 -
Phco3g02731 316 Coils Coil 90 110 - -
Phco3g02731 316 SMART 118neu2 43 141 IPR006578 -
Phco3g02731 316 ProSiteProfiles Myb-like domain profile. 36 97 IPR001005 -
Phco3g02731 316 MobiDBLite consensus disorder prediction 142 160 - -
Phco3g02731 316 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02731 Phco-Chr3 53761666 53762616 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco3g02731 Myb_DNA-bind_4 7.3e-19 CL0123