Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02659 ATGTTTAAATTCCTCAAAGAGGTCGTTGGTGGATCTGGAACCGGCCTCAAGGATCTCCCGTACAACATCGCCGAACCTTTCCCTTCCGCCTGGGGCTCCTGGACTCACTCTCGCGGCACCTCCAAGGATGACGGTTCTCCTGTCTCCGTCTTCTCTCTCTCCGGCTCCAATGCTCAGGACGGCCACTTAGCTGCTGCGCGCAACGGCGTCAAGCGTCTTCGAACTGTTAGGCATCCGAATATATTGTCGTTTCTTCACAGCGCTGAGATTGAGACTTACGATGCAGGTTCGCCGAAGGTTACGATATATATTGTGACTGAGCCTGTGATGCCGCTATCTGAGAAAATCAAGGAGTTAGGGCTTGAAGGTACACAAAGGGATGAATATTATGCTTTGGGTCTTCATCAAATAGCTAAAGCTGTGAGCTTCTTGAATAACGATTGTAAACTTGTTCATGGTAATGTGTGCTTGGCTAGTGTTGTTGTGACACCGACTTTGGACTGGAAGCTTCATGCTTTTGATGTTCTATCTGAGTTTGATGGGAGTAATGAAACATCTTCTGGTCAAATGCTGCAATATGCATGGCTTGTTGGATCACAATACAAACCAATGGAGTTGGCGAAATCAGACTGGGATGCAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGCTGCCTAATCTATGAGGTATTCTCTGGTCTGAGGTTGGGCAAGACAGAGGAGTTACGCATCACTGGTTCCATCCCCAAGTCTCTGCTTCCAGATTACCAACGGTTATTGAGTTCCCTGCCCTCTCGTAGATTAAACACATCAAAGCTTATAGAAAATAGCGAATACTTTCAAAATAAGCTGGTAGACACAATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTGGAGAGAGACACCTTCTTCCGCAAGCTTCCAAATTTAGCTGAGCAACTTCCTCGCCAGATAGTGTTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCTCAGCTTTGATTGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCAGAGGAGTTTAATGTAAAGGTACTTCCTACAATAGTTAAACTCTTTGCCTCCAATGATCGAGCTATCCGAGTTGGCCTTCTCCAACATATTGATCAGTATGGAGAGTCTTTATCACCGCAAGTTGTTGATGAGCAAGTTTACCCTCATGTTGCTACTGGATTCTCCGACACATCTGCTTTTCTCAGAGAACTGACTCTGAAGTCTATGTTAATTCTGGCTCCAAAGTTGTCCCAAAGGACCATCTCAGGGACATTATTGAAGTATTTGTCAAAGTTGCAGGTTGATGAAGAACCGGCAATTAGAACAAATACTACCATATTATTAGGCAATATTGGAAGCTACTTAAACGAAGGAACAAGAAAAAGAGTTTTGATCAACGCTTTTACAGTTCGTGCATTGCGTGATACTTTTCCACCTGCTAGAGGAGCAGGTATTATGGCTTTATGCGCCACCAGTTCCTACTATGACATCACTGAAGTTGCGACCCGGATTCTTCCTAATGTTGTTGTGCTCACAATTGATCCTGACAGTGATGTTAGAACTAAGGCATTTCAAGCGGTTGATCAGTTTTTGCAGATAGCCAAGCAACATTATGAAAAGGCAAATGCATCAGATACCACTGGTGCTGCAAGTGTGGGAAGCTCATCTGTTCCAGGAAATGCTAGTTTGCTCGGATGGGCTATGAGTTCTTTGACCTTGAAGGGTAAACCTTCTGATCAGGTTCCAGTTGCTTCTTCAAGTTCGACTGCAGTCACTTCAACATCTTCTAATGGTACCACAGGCATTGAGACACCATCAACAGCACCTGCTCGGGTAAGCTCCACAACAGATTTGGCTGAACACCCTGTCCCAACATCTCCTACATCAACGGATGGCTGGGGGGAACTTGAGAATGGAATTCAAGACGAGCATGAAAGTGACAGGGATGGGTGGGATGAACTGGAACCACTTGAAGAGACTAAGCCAGCTCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACAGACAAAACAAGCCTCAAATTTGCTATCCAAAACTACACCAAAATTGAACAAGGATGAGGATGATGATTTGTGGGGATCTATAGCAGCTCCTGCTCCAAAAACTGGAAGACCTTTAAGTTTGAAAACAGCTCAAACTGATGATGATGATGATCCTTGGGCGGCCATTGCTGCTCCAGCACCCACTACCAAGGCCAAGCCGTTATCCACTAGCAGAGTTAGGGTAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGCGGATAAACCGAACATCATCGGGAATGTAA 2391 0.4509 MFKFLKEVVGGSGTGLKDLPYNIAEPFPSAWGSWTHSRGTSKDDGSPVSVFSLSGSNAQDGHLAAARNGVKRLRTVRHPNILSFLHSAEIETYDAGSPKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFDGSNETSSGQMLQYAWLVGSQYKPMELAKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRLGKTEELRITGSIPKSLLPDYQRLLSSLPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALIALLKMGSWLSAEEFNVKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSPQVVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTISGTLLKYLSKLQVDEEPAIRTNTTILLGNIGSYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRTKAFQAVDQFLQIAKQHYEKANASDTTGAASVGSSSVPGNASLLGWAMSSLTLKGKPSDQVPVASSSSTAVTSTSSNGTTGIETPSTAPARVSSTTDLAEHPVPTSPTSTDGWGELENGIQDEHESDRDGWDELEPLEETKPAPALANIQAAQRRPVSQPISQTKQASNLLSKTTPKLNKDEDDDLWGSIAAPAPKTGRPLSLKTAQTDDDDDPWAAIAAPAPTTKAKPLSTSRVRVAKPAAPKLGAQRINRTSSGM 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02659 796 MobiDBLite consensus disorder prediction 594 668 - -
Phco3g02659 796 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 9 772 - -
Phco3g02659 796 Gene3D Transferase(Phosphotransferase) domain 1 109 279 - -
Phco3g02659 796 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Phco3g02659 796 MobiDBLite consensus disorder prediction 594 654 - -
Phco3g02659 796 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02659 796 SUPERFAMILY Protein kinase-like (PK-like) 38 287 IPR011009 -
Phco3g02659 796 Gene3D - 282 561 IPR011989 -
Phco3g02659 796 SUPERFAMILY ARM repeat 293 552 IPR016024 -
Phco3g02659 796 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Phco3g02659 796 SMART serkin_6 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02659 796 MobiDBLite consensus disorder prediction 690 796 - -
Phco3g02659 796 MobiDBLite consensus disorder prediction 691 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02659 Phco-Chr3 53152097 53165005 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Phco3g02659 None None None