Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02647 ATGTTCATGGAGTTTCATCTTTACCTTTACATTCTCTACATAATCCTGTTCTTACATATGTTTCCAGAATCAGCTAACTGTCAACAAGCATACCTCAACAGCACTGTCTATGACTGCTCTGAGAACCCGTCTGCACCAAAAGGATACCTGTGCAATGGCCTTCAAAAGTCATGCACATCCTTCTTACTTTTCAGGTCCAAATCTCCCTATGACAACCCTGTAAGCATTGCCTACCTTCTAGGCTCTGAAGCATCTACCATAGCCTCAATCAACAACATCTCAAGAGATGACAAGATTCCTTCCAATAAGTCAATCATTGTTCCTGTATTCTGTTCATGTTCTGGAAATATCTACCAGCATAACACACCTTACACTGCCACCAAGAATGACACCTACTTCAAGTTGGTTACAGAAACTTACCAAGGCCTCACCACCTGCCAGGCACTGATGGGTCAGAATTACTATGCCTCTAGTGACATTAGAGTTGGTGCTGAGCTCACAGTTCCAGTAGTATGTGCTTGTCCCACTGAAAATCAGACAGCAAGAGGGGTCACTTCCTTGCTGGTTTATTCAGTGAATAATGGTGATACTATTAAGTCCATTGGAGAGGCTTATGGTGTTGACGAACAAAGTATGCTAGAGGCCAACGGGTTGTCAGTGTCGCCAGGTGCAGAGAACATCATCATCATCTATGCCACAACTCCCATCTTGGTTCCTCTCAGAGGGAAGAGTTGCAAAGAGGACCCGGATAGTTTCTATTGTACTTGCTCACAGGGAAGGGTTGAGGGTGGAACCTTCATGGGGTTCCAATGTAATGAATCTGATGATAAAAACTTTCCTACCAAATTGGTCGCTTCGTTAGGTGTTGGAATTGGCGCAGGCTTTGTGTGTTTGTTTCTTTTGGGGTACAAATCATATCAATATATTCAGAAAAGGAGAGAAAGTATTCGTAAGGAAAGCTTATTCAGGAGAAATGGTGGCTACTTGTTACAAGAGAAGCTCTCTTTTTATGGAAATGGAGAAATGGCAAAGCTGTTTAAAGCAGACGAGCTAGAGAAAGCAACAGATAACTATAACAAGAGTAGATTTCTTGGTCAGGGTGGCTTTGGCACTGTGTATAAAGGAATGCTACCAGATGGGACCATTGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATAGAGACTTTTGTCAATGAAGTGGTGATTCTATCCCAGATCAACCACAGGAACATTGTCAAACTCTTTGGTTGCTGTCTTGAGACAGAAACTCCTTTACTAGTTTATGAATTCATTCCCAATGGAACACTCTCTCACCATATCCACAGGAGAGACAATGAGACCTCCCTTTCATGGGAGAGTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTTACATATATGCATTTTGCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCTACCAACATACTTTTAGACAGCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGACAAGACTCACTTGACCACAGCTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTAAGTTTTCAGATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTAGTAGAGCTCATAAGTGGGAGAAAGCCAATTTCATTCTTAGAGGAAGATGAGGGTCACAATCTGATTGCACAGTTTCTTTCTCTGATGAAGGAGAACAAAGTTTATGAAATTTTAGATGGCAGGGTGGTTAAGGAAGCAAGGAAAGATGACATTCTTGCCATTGCAAACCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAGTGGAATTAGAAGCATTGAGAAAGGTGCAAAGTTTCTTAGAGATCAACCATGATCATGAGTACACAACAAGTGACACAGTTCAAGAATTCACAGATGAAAGCATGCCACTGTGCGTAGAACTAGACTCCACATCATTTTAG 2016 0.4157 MFMEFHLYLYILYIILFLHMFPESANCQQAYLNSTVYDCSENPSAPKGYLCNGLQKSCTSFLLFRSKSPYDNPVSIAYLLGSEASTIASINNISRDDKIPSNKSIIVPVFCSCSGNIYQHNTPYTATKNDTYFKLVTETYQGLTTCQALMGQNYYASSDIRVGAELTVPVVCACPTENQTARGVTSLLVYSVNNGDTIKSIGEAYGVDEQSMLEANGLSVSPGAENIIIIYATTPILVPLRGKSCKEDPDSFYCTCSQGRVEGGTFMGFQCNESDDKNFPTKLVASLGVGIGAGFVCLFLLGYKSYQYIQKRRESIRKESLFRRNGGYLLQEKLSFYGNGEMAKLFKADELEKATDNYNKSRFLGQGGFGTVYKGMLPDGTIVAVKKSKEIERNQIETFVNEVVILSQINHRNIVKLFGCCLETETPLLVYEFIPNGTLSHHIHRRDNETSLSWESRLRIACEVAGAVTYMHFAASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSKFSDKSDVYSFGVVLVELISGRKPISFLEEDEGHNLIAQFLSLMKENKVYEILDGRVVKEARKDDILAIANLAMRCLRLNGKKRPTMKEVSVELEALRKVQSFLEINHDHEYTTSDTVQEFTDESMPLCVELDSTSF 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02647 671 SUPERFAMILY Protein kinase-like (PK-like) 342 628 IPR011009 -
Phco3g02647 671 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Phco3g02647 671 SMART LysM_2 69 108 IPR018392 -
Phco3g02647 671 SMART LysM_2 189 239 IPR018392 -
Phco3g02647 671 SMART LysM_2 123 169 IPR018392 -
Phco3g02647 671 Pfam LysM domain 190 219 IPR018392 -
Phco3g02647 671 ProSiteProfiles Protein kinase domain profile. 358 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02647 671 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 105 637 IPR045274 GO:0007166
Phco3g02647 671 Pfam Protein kinase domain 358 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02647 671 Gene3D Transferase(Phosphotransferase) domain 1 434 655 - -
Phco3g02647 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Phco3g02647 671 SMART serkin_6 358 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02647 671 CDD STKc_IRAK 364 631 - -
Phco3g02647 671 FunFam Wall-associated receptor kinase 2 434 651 - -
Phco3g02647 671 FunFam Wall-associated receptor kinase 2 329 433 - -
Phco3g02647 671 Gene3D Phosphorylase Kinase; domain 1 330 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02647 Phco-Chr3 53073274 53075493 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco3g02647 Pkinase 1.1e-49 CL0016