Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02646 ATGGAGCTTCTTAACAACCTCCACATTCTCACTACAATTCTTCTTCTATGCATGTTCCCTCATTCACTCAAGTGCCAACAAGCATACCTCAATGCCACTGTCTATGACTGTTCTGACAACCCTTCTGCACCAAAAGGGTACCTTTGCAATGGCCTTCAAAAGTCATGCACTTCCTTCTTACTTTTCAGGTCCAAACCTCCCTATGATAGCCCTGAAAGAATTGCCTATCTTCTTGGCTCTGAGGCATCTACCATAGCCTCAATCAACAAGATCTCAAGAAATAACAAGATTGCTTCCAACAAGACAATCATAGTTCCTGTTTTCTGTTCATGTTCAGGAAACATCTACCAGCATAACACACCTTACACTGCCAGCAAGAATGACACCTATTTTCAGTTGGTAAAAGAAACCTTCCAAGGCCTTACTACCTGTCCGGCACTGATGGGTCAGAATTACTATGCAGCTACCAGAATTGCAATTGGTGGTGAGCTCACAGTTCCGTTGTTATGTGCTTGTCCAACTGAAAATCAAACAGCAAGAGGGATCACCTCCTTGCTGGTTTACTTGGTGAACTATGGTGATACTATTAAGTCCATAGCAAAGGCTTATGCTGTGGAAGAACAAAGTATACTTGAGGCCAATGAGTTGGTTGTGCCACAAAGTGAAAACAGCAGAATGACTCTCCTTTCCTTGACACCTCTTTTAGTTCCTCTAATAGGGAAGAGCTGCAAAGAGAACCCAGATAAATTCTATTGTAAATGTTATCAAGCACCAGATAGAAGCCCTAAGGGGCCTTTCTGTGATGAATCTGATGGTCAGAAATTCCCTGCCAAGTTGCTAGCCGCTTTAGGAGCAGGACTTGGCGTAGGCTTTCTCTGTTTGTTTCTTTTGGGGTACAAATCATATCAATATATACAGAAAAAGAGAGAAAGTATCCGAAAGGAAAACCTATTCAGGCAAAATGGTGGCTACTTGTTACAGGAGAAGCTCTCATGTTACGGAAATGGAGAAATGGCAAAGCTTTTTACAGCTGAGGAACTACAAAGAGCAACAGATAACTACAACAGAAGTAGGTTTCTTGGTCAGGGTGGCTTTGGCACAGTGTTCAAAGGAATGCTACCAGATGGAACCATAGTTGCAGTTAAAAGGTCCAAAGAAATTGAAAGGAACCAGATAGAGACTTTTGTCAATGAAGTTGTGATTCTATCCCAGATCAACCACAGGAACATTGTCAAACTATTAGGTTGTTGTCTCGAGACAGAAACTCCTTTACTAGTCTATGAATTCATTACCAATGGAACACTCTCTCACCATATCCACAGGAGAGACAATGAACCCTCCCTTTCATGGGAGAATCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTGGCATATATGCATTTTGCAGCTTCTATTCCCATTTTTCATAGAGACATCAAACCTACCAACGTGCTTTTAGACAGCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGACAAGACTCATTTGACCACAGCTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTAAGTTTTCAGATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTAGTAGAGCTCATAAGTGGGAGAAAGCCAATTTCATTCTTAGAGGAAGATGAGGGTCAGAATTTGATTGCACAGTTTCTATCTCTGATGAAGGAGAACCAAGTTTATGAAATTTTAGATGGAAGGGTGGCTAAGGAAGCAATGAAAGATGACATTCTTGCCATTGCAAACCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGGCCAACAATGAAGGAGGTTTCACTGGAACTAGAAGCATTGAGAAAGGTGCAAAGTTCCTTACAGATCAACCATGATCATGAGCACAAAAGTAGTAATATGGTTGAAGAGTGCACAGAGGAAAGCATGTCACTGTCCTTACAACTAGACTCTACATCCTTCTAG 2004 0.4152 MELLNNLHILTTILLLCMFPHSLKCQQAYLNATVYDCSDNPSAPKGYLCNGLQKSCTSFLLFRSKPPYDSPERIAYLLGSEASTIASINKISRNNKIASNKTIIVPVFCSCSGNIYQHNTPYTASKNDTYFQLVKETFQGLTTCPALMGQNYYAATRIAIGGELTVPLLCACPTENQTARGITSLLVYLVNYGDTIKSIAKAYAVEEQSILEANELVVPQSENSRMTLLSLTPLLVPLIGKSCKENPDKFYCKCYQAPDRSPKGPFCDESDGQKFPAKLLAALGAGLGVGFLCLFLLGYKSYQYIQKKRESIRKENLFRQNGGYLLQEKLSCYGNGEMAKLFTAEELQRATDNYNRSRFLGQGGFGTVFKGMLPDGTIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEFITNGTLSHHIHRRDNEPSLSWENRLRIACEVAGAVAYMHFAASIPIFHRDIKPTNVLLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSKFSDKSDVYSFGVVLVELISGRKPISFLEEDEGQNLIAQFLSLMKENQVYEILDGRVAKEAMKDDILAIANLAMRCLRLNGKKRPTMKEVSLELEALRKVQSSLQINHDHEHKSSNMVEECTEESMSLSLQLDSTSF 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02646 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Phco3g02646 667 Pfam LysM domain 188 219 IPR018392 -
Phco3g02646 667 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 103 637 IPR045274 GO:0007166
Phco3g02646 667 Gene3D Phosphorylase Kinase; domain 1 328 429 - -
Phco3g02646 667 SUPERFAMILY Protein kinase-like (PK-like) 338 624 IPR011009 -
Phco3g02646 667 FunFam Wall-associated receptor kinase 2 325 429 - -
Phco3g02646 667 Pfam Protein tyrosine and serine/threonine kinase 357 622 IPR001245 GO:0004672|GO:0006468
Phco3g02646 667 CDD LysM 187 219 IPR018392 -
Phco3g02646 667 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Phco3g02646 667 ProSiteProfiles Protein kinase domain profile. 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02646 667 FunFam Wall-associated receptor kinase 2 430 647 - -
Phco3g02646 667 Gene3D Transferase(Phosphotransferase) domain 1 430 653 - -
Phco3g02646 667 SMART serkin_6 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02646 667 CDD STKc_IRAK 360 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02646 Phco-Chr3 53068887 53071507 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco3g02646 PK_Tyr_Ser-Thr 3.2e-49 CL0016