Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02630 ATGGAAGGCCATGACCCACCACCCCAAAACAACCCTTTTCTCTTCACGCCTAATTCGGGGCTGCACAACCCTTTGGAACCTCCAGAGCAAGGGCTACGTGACTTTGACTGGGGTAACGTTTTCTCTGCCCAAAACAGCTTCTTGTTGCTTGATGGGGATGCCAAGGAAACTGTTCAATGTGCTGCTTCTTCCTCTTCCTCTTTTATGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGAAACCAGGAGAAAAGGAAAGGTGGGAGGGTGAAGAAAACAACACGAGTGCCCAGGTTTGCTTTTCAAACGAGAAGTGCAGATGATATTTTGGATGATGGCTATCGCTGGAGGAAATATGGACAGAAAGCTGTGAAGAATAGCATATATCCCAGAAGCTATTACCGGTGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAAAGGCTGTCAAAAGACACAAGCATTGTGGTGACAACATACGAGGGAATTCACAACCATCCATGCGAGAAGCTCATGGAAACTCTAACCCCTCTTCTCAAGCAAATACAGTTTCTTGCTAGCTTGTAA 573 0.4607 MEGHDPPPQNNPFLFTPNSGLHNPLEPPEQGLRDFDWGNVFSAQNSFLLLDGDAKETVQCAASSSSSFMAQNKVVCEEEKGNQEKRKGGRVKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02630 190 FunFam WRKY transcription factor 57 97 171 - -
Phco3g02630 190 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 172 IPR044810 GO:0003700
Phco3g02630 190 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g02630 190 SUPERFAMILY WRKY DNA-binding domain 104 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g02630 190 MobiDBLite consensus disorder prediction 1 29 - -
Phco3g02630 190 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g02630 190 Gene3D WRKY domain 96 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g02630 190 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02630 Phco-Chr3 52940590 52943272 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco3g02630 WRKY 4.5e-25 CL0274