Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02623 ATGGCAATGGCTACTATTTCTTCTAGTCTGCTTTTCTTTCTCTTTTGGCTCCATGCAATAATGACAACATGTGAAGCCGGCTTCAGACCAGATTTCCAAACCAGCAAGTTCTGTAATTCAAATATGAACTACACAGCCAATAGCACCTTCAACACCAACCTCCACACCCTCTTATCCACCCTCACTTCCCACACAGAAATCGACTACGGTTTCTACAATTTCTCACAAGGCCAAAACTCAGACAAAGTATATGCCATAGGGTTGTGCAGAGGAGATCTTAAGGTAGACGAGTGTCGCAGCTGCCTCAACTCCTCTCAAGCCAATCTCACACAGCTTTGTCCAAACCAGAAAGAGGCAATTTCGTGGGAAGAAAAATGCATGCTGCACTATTCCAACCGCTCAATATTTCACACCATGGAGACTTATCCTTTCTATTACATGCACAACGCCAACAATGCAACGGATGTGGATGAGTTCAATAAAGTGTTAGGTGGGTTACTGAGAAATCTAAGGGAAAAGACTGCAGGGGGTGACTCTCGTCATAAGTATGCCACGGACACTGCAATTGTCGCAAATTTTCAACCTATATACGGTCTTATGCAGTGTACACCTGACTTGTCAAGGCAAGATTGCGGTGACTGCTTGGATTGGAGCATCTCAAGTATCCGAAGGTATTCCAAAGACAGGGTTGGTGCCTTAGTTCTTCTACCCAGTTGTAATGTTAGGTTTGAAATCTACCAGTTCTACCCTGCACTACCACCTGCATCACTTTCGCTTCACCAAGAAGATCATGGCAACTCTTTGCGAACTGCAATCATCATAGTTGTGCCAACTGTTATCGTTGTTCTTGTTCTGCTGATTGTTATTAGCAGATATTTGAGAAGGAAAGCAAGAAAAAATCTTCTTCCATCTGAAGATGGAGACGATGATGAAATTGAAATGGTTGAATCATTGCAATTCAACTTAAACACAATACAAGTTGCAACAAGTAACTTTTCTGATTCTAATAAATTAGGAGAAGGTGGGTTTGGATCTGTTTACCAGGGAAAGCTCTCTAATGGACAAGTGATTGCTGTCAAAAGGTTGTCAAGGAATTCTGGTCAAGGAGACTTGGAATTTAAGAATGAAGTCCTTTTGCTGGCTAAGCTTCAACACAGAAATTTAGTTAGGCTTCTTGGTTTTAGTTTGCAAGGAAGAGAAAAGCTACTTGTTTATGAATTTGTTCCTAATAAAAGTCTTGATCACTTCATATTTGATCCAACAGAGAAAGCACAATTGGATTGGGATACACGTTACAAAATCATTAAAGGCATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGATTACGCATTATACATCGTGATCTTAAATCAAGTAATATTCTCTTAGATAAAGAAATGATTCCTAAAATATCAGATTTTGGTTTGGCAAGATTAATTACTGTAGATCAAACACAAGAAAATACCACCAGCAGAGTTGTTGGAACCTTTGGATACATGGCACCCGAGTACATAATGCAAGGACAGTTTTCAGTGAAATCAGATGTTTTTAGTTTTGGTGTACTAGTTCTTGAGATTGTAAGTGGCCAAAAGAACCATGGTGTTCGTCATGAGAAGAATGGGGAAGATCTATTAAGCTTTGTATGGAGAAACTGGAGAGAGGGGACAGTTACAAATATTATAGATCCAGCACTGAAGAATAGTTCACAAAATGAAATGATAAGATGCATTGACATTGGTTTACTCTGTGTTGAAGAAGATTTAAACAACAGACCAACCATGGCTAACGTTGCACTCATGCTTAATAGTTGTTCTATCACTCTCCCAGTGCCTAAAAAACCTGCATTTTTCATAGATAGTGCAACTGGAAACCTTCCAAACGTGTCATGGGAAGATTCATGGGCAACAAAATGGACTCAATCCAGTGGTAGATCAGCTCAGGAATCAGCGAATGAGGCTTCAATTACTGAATTATACCCTCGTTAG 1992 0.3981 MAMATISSSLLFFLFWLHAIMTTCEAGFRPDFQTSKFCNSNMNYTANSTFNTNLHTLLSTLTSHTEIDYGFYNFSQGQNSDKVYAIGLCRGDLKVDECRSCLNSSQANLTQLCPNQKEAISWEEKCMLHYSNRSIFHTMETYPFYYMHNANNATDVDEFNKVLGGLLRNLREKTAGGDSRHKYATDTAIVANFQPIYGLMQCTPDLSRQDCGDCLDWSISSIRRYSKDRVGALVLLPSCNVRFEIYQFYPALPPASLSLHQEDHGNSLRTAIIIVVPTVIVVLVLLIVISRYLRRKARKNLLPSEDGDDDEIEMVESLQFNLNTIQVATSNFSDSNKLGEGGFGSVYQGKLSNGQVIAVKRLSRNSGQGDLEFKNEVLLLAKLQHRNLVRLLGFSLQGREKLLVYEFVPNKSLDHFIFDPTEKAQLDWDTRYKIIKGIARGLLYLHQDSRLRIIHRDLKSSNILLDKEMIPKISDFGLARLITVDQTQENTTSRVVGTFGYMAPEYIMQGQFSVKSDVFSFGVLVLEIVSGQKNHGVRHEKNGEDLLSFVWRNWREGTVTNIIDPALKNSSQNEMIRCIDIGLLCVEEDLNNRPTMANVALMLNSCSITLPVPKKPAFFIDSATGNLPNVSWEDSWATKWTQSSGRSAQESANEASITELYPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02623 663 CDD STKc_IRAK 338 604 - -
Phco3g02623 663 FunFam Cysteine-rich receptor-like protein kinase 10 143 248 - -
Phco3g02623 663 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Phco3g02623 663 MobiDBLite consensus disorder prediction 642 663 - -
Phco3g02623 663 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 135 - -
Phco3g02623 663 Gene3D Transferase(Phosphotransferase) domain 1 408 610 - -
Phco3g02623 663 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
Phco3g02623 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 661 - -
Phco3g02623 663 MobiDBLite consensus disorder prediction 642 656 - -
Phco3g02623 663 ProSiteProfiles Protein kinase domain profile. 332 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02623 663 Pfam Protein tyrosine and serine/threonine kinase 335 600 IPR001245 GO:0004672|GO:0006468
Phco3g02623 663 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Phco3g02623 663 Pfam Salt stress response/antifungal 151 245 IPR002902 -
Phco3g02623 663 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Phco3g02623 663 Gene3D - 32 134 IPR038408 -
Phco3g02623 663 Gene3D - 141 248 IPR038408 -
Phco3g02623 663 SUPERFAMILY Protein kinase-like (PK-like) 315 603 IPR011009 -
Phco3g02623 663 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Phco3g02623 663 FunFam Cysteine-rich receptor-like protein kinase 17 301 407 - -
Phco3g02623 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Phco3g02623 663 SMART serkin_6 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02623 663 FunFam cysteine-rich receptor-like protein kinase 10 408 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02623 Phco-Chr3 52861925 52865087 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco3g02623 PK_Tyr_Ser-Thr 7.8e-48 CL0016