Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02622 ATGGAGCTTCACAAGCTCAATATTCTTATCACAATCCTGCTCCTATATTTGTTCCCTCACTCACAAAATTGCCAACAAGTAGACCTCAACAACACTGTCTATGACTGCTCTAACGACCCTTCTGTATCAAAAGGATATCTTTGCAATGGCCTTCAAAACTCATGCACTTCCTTCTTACTTTACAGGTCCAAATCTCCCTATGACAACCCTGTGATCATTGCTTACCTTCTTGGCTCTGAAACATCTGATATAACCTCAATAAACAATATCTCAGCAACTCACAATATTCCTTCCAATAAGTCAATCATTGTTCCTGTCTTCTGTTCATGTTATGGAAACATCTACCAGTACGACACTCTTTACTCTGTCAAAGAGAATGATACCTACTGGGCGTTGGTAAAAGAAACCTTCCAAGGCCTCACCACCTGCCAAGCAATTATGGGTCAGAATTACTATCCTCCAACTGATATTGCAATTGATGCAGAGCTCAAGGTTCCAATGTTATGTGCTTGTCCCACTGCAAATCAGACAGCAAGAGGGGTCACCTCTTTGCTGGTTTACTCGGTCATCTCTGGTGACACTATTAAGTCCATAGGAGAGGCTTATGGCGTGGATGAACAAAGTATACTAGAGGCCAATAAGTTGTCAGTGCCAAGTGCAAACAGCAGCATGAGTCTCCTTGACTTCACACCTATTTTAGTTCCTCTAATAGGGAATAACTGCGAAGAGAACCCAAATGAATTCTACTGTAAATGTTACCGAGAGCCACAAACAGATGGAAGCTCCAAGGGGCTATTATGTGATGAATCTGGTGACAAAGAATTTCCTACCAGATTGGTTGCTGCTTTAGGTGTTGGAATTGGCGCAGGCTTTGTGTGTTTGTTTCTTTTGGGGTACAAATTATATCAATATATTCAGAAAAGGAGAGAAAGTATTCGTAAGGAAAGCTTATTCAGGCGAAATGGTGGATACTTGTTACAAGAGAAGCTCTCTTTTTATGGAAATGGAGAAATGGCAAAGCTCTTTAAAGCTGACGAGCTAGAGAAAGCAACAGATAACTATAACAAGAGTAGATTTCTTGGTCAGGGTGGCTTTGGCACTGTGTATAAAGGAATGCTACCAGATGGGACCATTGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATAGAAACTTTTGTCAATGAAGTGGTGATTCTATCCCAGATCAACCACAGGAACATTGTCAAACTCTTTGGTTGTTGTCTTGAGACAGAAACTCCTTTACTGGTCTATGAATACATTCCCAATGAAACACTCTCTTACCATATCCACAGGAGAGACAATGAGCCCTCCCTTTCATGGGAGAGTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTTACATATATGCATTTTGCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCTACCAACATACTTTTAGACAGCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGATAAGACTCACTTGACCACAGCTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTCAGTTTTCAGATAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTCGTAGAGCTCATAAGTGGGAGAAAGCCAGTTTCATTCTTAGAGGAAGACGAGGGTCAGAATCTGATTGCACAGTTTCTTTCTCTAATGAAGGAGAACAAAGTTTATGAAATTTTAGATGGTAGGGTGGTTAAGGAAGCAAGAAAAGATGACATTCTTGCCATTGCAAACCTTGCAATGAGATGCCTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTCTCAGTGGAATTAGACGCATTGAGAAAGGTGCAAAGTTTCTTAGAGATCAACCATGATCATGAGTACACAACAAGTGACACAGTTGAAGAATACACAGATGAAAGCATGCCACTGTGCTTAGAACTAGACTCCACATCATTTTAG 2004 0.4067 MELHKLNILITILLLYLFPHSQNCQQVDLNNTVYDCSNDPSVSKGYLCNGLQNSCTSFLLYRSKSPYDNPVIIAYLLGSETSDITSINNISATHNIPSNKSIIVPVFCSCYGNIYQYDTLYSVKENDTYWALVKETFQGLTTCQAIMGQNYYPPTDIAIDAELKVPMLCACPTANQTARGVTSLLVYSVISGDTIKSIGEAYGVDEQSILEANKLSVPSANSSMSLLDFTPILVPLIGNNCEENPNEFYCKCYREPQTDGSSKGLLCDESGDKEFPTRLVAALGVGIGAGFVCLFLLGYKLYQYIQKRRESIRKESLFRRNGGYLLQEKLSFYGNGEMAKLFKADELEKATDNYNKSRFLGQGGFGTVYKGMLPDGTIVAVKKSKEIERNQIETFVNEVVILSQINHRNIVKLFGCCLETETPLLVYEYIPNETLSYHIHRRDNEPSLSWESRLRIACEVAGAVTYMHFAASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELISGRKPVSFLEEDEGQNLIAQFLSLMKENKVYEILDGRVVKEARKDDILAIANLAMRCLRLNGKKRPTMKEVSVELDALRKVQSFLEINHDHEYTTSDTVEEYTDESMPLCLELDSTSF 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02622 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Phco3g02622 667 FunFam Wall-associated receptor kinase 2 430 647 - -
Phco3g02622 667 SUPERFAMILY Protein kinase-like (PK-like) 338 621 IPR011009 -
Phco3g02622 667 FunFam Wall-associated receptor kinase 2 325 429 - -
Phco3g02622 667 CDD LysM 186 219 IPR018392 -
Phco3g02622 667 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02622 667 SMART serkin_6 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02622 667 Gene3D Phosphorylase Kinase; domain 1 329 429 - -
Phco3g02622 667 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 111 633 IPR045274 GO:0007166
Phco3g02622 667 Pfam LysM domain 187 219 IPR018392 -
Phco3g02622 667 Pfam LysM domain 121 166 IPR018392 -
Phco3g02622 667 Gene3D Transferase(Phosphotransferase) domain 1 430 651 - -
Phco3g02622 667 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Phco3g02622 667 ProSiteProfiles Protein kinase domain profile. 354 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02622 667 CDD STKc_IRAK 360 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02622 Phco-Chr3 52853523 52856476 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco3g02622 Pkinase 2.7e-49 CL0016