Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02585 ATGGCGGTGGTGAGTCCCGTGCCTGCAACATCACAAAGGATGGGTTCTGTGAGATCACCTTCTGATGCTAGTGGGGAAATTTTGGAGGAGCCTAATCCAGGTGTGGTTGATCAGCCAATCTATGTTGCTGTGACAAAAGAAGTGAAGGAGAGCAAATTAAATCTGATATGGGCAATACAACACTCCCGAGGAAAGAGGATTTGCATTCTTTATGTTCATGTTCGTGCAAAAATGATCCCCCTACTGGGAGGTAAATTCCTCACAAGTGCACTAAAAGAGGAGCAGGTTCAAGCATACTGGGAAGAAGAAAGGCAAGGCATGCATAGGACTCTGGACGAATATCTTGAAATCTGTCGACGGATGGGGGTGCGAGAAGAAAAACTGCACATTGAAATGGATAGCATTGAAAAAGGAATTATAGAGCTTGTCTCTCAGCATGACATCCGAAAGCTTGTAATGGGAGCAGCATCAGATAAGTACTATAATAGGAGAATGATGGACCTGAGGTCTAAGAAAGCCATCTATGTGTGTAAACAAGCTCCAGCTTCTTGTCACATACAGTTTATCTGCAAAGGGCACCTTATACACACAAGGGATCACCGTATGAATGAAGGTAATGTAGAGGTTGCATCTCCTTTGGTGCAGCAAGTGCCAAACTCTGTGAGAACTTTGAGATCACAGTCTGTTATACTGGGGCAAGATCGCCGAGCAAATCTAACCAATCATGCACTAGAGTTTTTACGCAGAGTTAGGTCTGTCAGTGATGGACATGGAGCAAGCTCTCCGGCTGTTTCTTCTCCAGAAGAAACTGAAGGGTTTTCAACTCCTTGTGACAGGATGGGTACAGAAGTAAGTTCTGATGAATCAGATAGGTTGTCAAGGATGAGTCCTTCTGGCTTGTCAACATGCTCTGACAGTGCAGTTGAGCTAGCTACCCCAAGATTGATTACTGAAAGGAGTGAGAATGCATTAGAGTTGACTTTGAGTCAGCTGGTTATAGAGGATCTTCATCATTCATCTCCTCCTAGTACAGTGGACAGTGGAATAGATGATACTATCTACGACCAGCTTCAACAGGCAATGGCTGAGGCTGAGGATGCTTCGCTAACTGCATATAAAGAAACTGTAAGGCGTAGGAATGCTGAAAAAGAAGCCATTGAAGCTATACGCAAGGCTAAAGCTTCTGAAAGCTTATATAGAGAGGAGTTGAACCTGAGGAAATTGGCAGAGGAAGAACTTAGGAAAGAAAAAGAAGATCTTGAGAATGCAAAGAGCCTGAGAGACAAAGTTAAGGAAGAACTCCACCTCGCCCTTGATCAGAAGGCGTCTCTGGAGAGTCAGATTGCATCATCTGAACTTATTATAAAGGAGCTGGAGCAGAAGATTGTATCTGCTGTGGATCTGTTACAGAGCTACAAGAATGAACGAGAGGAATTGCAGATTCAGCGTGATAATGCATTGAGAGAGGCTGAAGAATTGAGGAAAAAGCAAGGAGAGGCCTCAAGCTCTCATGTCCCTCAATTGTTCTCAGAATTCTCTTTTTCAGAGATCAAAGAAGCAACAAATAACTTCAATCCATCCTTAAAAATTGGACAAGGTGGATATGGCAGTATATTTAAAGGTGTCTTGAGTTACACTGAGGTGGCTATAAAAGGGTTGCACTCCGACAGCATGCAAGGACCCTTGGAGTTTCAACAGGAGGTTGATGTGTTGAGCAAGCTAAGGCATCCCAATCTTATCACACTCATTGGAGCCTGCCCAGATGCATGGGCTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAAGATCGCCTTGCCTGCAAGGATAATACCCCTCCATTATCATGGCAAACTCGAATTCGCATTGCCACTGAACTATGCTCCGCCCTCATCTTTCTCCATTCCAGTAAACCTCACAGCATAGTGCATGGTGACTTGAAACCCTCCAACATTCTGCTTGATGCAAACCTTATTAGCAAGCTTAGTGACTTTGGAATATGTCGTATATTATCAAACTATGAGAGTTCCAGTAGAAATTCTACACAGTTTTGGAAAACTGACCCCAAGGGAACATTTGTCTACATGGATCCTGAATTTCTTGCCTCAGGGGAACTTACTCCGAAGTCAGATGTTTATTCGTTTGGAATCATATTGTTGAGATTGTTGACTGGGAGACCAGCCTTGGGAATAACAAAGGAAGTGAAATATGCTTTAGACACTGGAAAGTTGAAATCCCTATTGGATCCTTTGGCTGGAGACTGGCCATTTGTGCAGGCTGAACAATTGGCTCGCTTGGCTTTGAGATGTTGCGATATGAACAGAAAGAGCCGGCCAGATCTTTATTCTGATGTCTGGAGGATACTTGATGCAATGAGGGTTTCTTCTGGAGGCACAAACTCCTTTGGACTAAGTTCTGAAGGACTTTCACAACCTCCATCATATTTTATTTGCCCAATCTTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTTACTTATGAAGCTGAGGCTATACGAGGATGGCTTGATGGTGGTAATGACAATTCACCAATGACTAATAGTAAGCTTGCACATCACAATCTTGTTCCCAATCGCGCTCTTCGCTCTGCAATCCAGGATTGGCTTCAAAACCACTGA 2649 0.4371 MAVVSPVPATSQRMGSVRSPSDASGEILEEPNPGVVDQPIYVAVTKEVKESKLNLIWAIQHSRGKRICILYVHVRAKMIPLLGGKFLTSALKEEQVQAYWEEERQGMHRTLDEYLEICRRMGVREEKLHIEMDSIEKGIIELVSQHDIRKLVMGAASDKYYNRRMMDLRSKKAIYVCKQAPASCHIQFICKGHLIHTRDHRMNEGNVEVASPLVQQVPNSVRTLRSQSVILGQDRRANLTNHALEFLRRVRSVSDGHGASSPAVSSPEETEGFSTPCDRMGTEVSSDESDRLSRMSPSGLSTCSDSAVELATPRLITERSENALELTLSQLVIEDLHHSSPPSTVDSGIDDTIYDQLQQAMAEAEDASLTAYKETVRRRNAEKEAIEAIRKAKASESLYREELNLRKLAEEELRKEKEDLENAKSLRDKVKEELHLALDQKASLESQIASSELIIKELEQKIVSAVDLLQSYKNEREELQIQRDNALREAEELRKKQGEASSSHVPQLFSEFSFSEIKEATNNFNPSLKIGQGGYGSIFKGVLSYTEVAIKGLHSDSMQGPLEFQQEVDVLSKLRHPNLITLIGACPDAWALVYEYLPNGSLEDRLACKDNTPPLSWQTRIRIATELCSALIFLHSSKPHSIVHGDLKPSNILLDANLISKLSDFGICRILSNYESSSRNSTQFWKTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYALDTGKLKSLLDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLYSDVWRILDAMRVSSGGTNSFGLSSEGLSQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDGGNDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02585 882 Gene3D HUPs 38 186 IPR014729 -
Phco3g02585 882 CDD STK_N 39 192 - -
Phco3g02585 882 ProSiteProfiles Protein kinase domain profile. 524 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02585 882 MobiDBLite consensus disorder prediction 258 272 - -
Phco3g02585 882 Gene3D Phosphorylase Kinase; domain 1 494 596 - -
Phco3g02585 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 811 882 IPR013083 -
Phco3g02585 882 SMART serkin_6 524 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02585 882 SUPERFAMILY Protein kinase-like (PK-like) 501 782 IPR011009 -
Phco3g02585 882 SMART Ubox_2 815 878 IPR003613 GO:0004842|GO:0016567
Phco3g02585 882 ProSitePatterns Protein kinases ATP-binding region signature. 530 551 IPR017441 GO:0005524
Phco3g02585 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Phco3g02585 882 CDD RING-Ubox_WDSUB1-like 813 868 - -
Phco3g02585 882 MobiDBLite consensus disorder prediction 254 304 - -
Phco3g02585 882 MobiDBLite consensus disorder prediction 1 29 - -
Phco3g02585 882 Pfam U-box domain 813 882 IPR003613 GO:0004842|GO:0016567
Phco3g02585 882 Coils Coil 354 374 - -
Phco3g02585 882 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 50 159 - -
Phco3g02585 882 PANTHER OS02G0152300 PROTEIN 40 877 - -
Phco3g02585 882 SUPERFAMILY RING/U-box 806 881 - -
Phco3g02585 882 ProSiteProfiles U-box domain profile. 811 882 IPR003613 GO:0004842|GO:0016567
Phco3g02585 882 Pfam Protein kinase domain 528 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02585 882 Coils Coil 399 496 - -
Phco3g02585 882 FunFam receptor-like protein kinase FERONIA 487 596 - -
Phco3g02585 882 Gene3D Transferase(Phosphotransferase) domain 1 597 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02585 Phco-Chr3 52445212 52451850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco3g02585 Pkinase 1.5e-41 CL0016