Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02504 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTTCAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTCTGAAAAAGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTGGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGATGACAGGTTACTAATGATGCTGTTATTGACCGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGGTGAACTTAAAGAACTAAGAGGAACAACATTATATCGTGCGACTGAATTGCAGAAGAAAAGCCTGCTTTCTCTGTATGAAACTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTCTGGGCGAATTCAGTATTTTGGACCCGTGCTTTGAACATTCCAATGCCTCGATCTTATGTATTTCCAGAAATGCAAGATGATCATGACAGTTGCATTCCTGAAGCTGATGAAAAAAGTAGCCAGGTTAAAAAATCTAACAATTTGACCAAGGAAGTGACATGTAACAGTTACACAATGACAGGAGAAACTGTCTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTTCCTTTCTCCATGTATCTTACTTTAGCTGCTCAAAGTCCCTTGCAGAATGACCAAGAAATTTCCATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTGTATCTGTATGGTTTTGTCATTGATGACAACACAGATGACTATGTCATGGTCCACTATCCAGCAGAAGCAATGAATACTATTTCCTTTTCAGAGTCCAAAGGGCAGCTTCTTGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACCCAAAACCTTTCTAGATAATGGGTTTTTTCCACTCGGGACCCAAATCAGTGGAGAAGATAACAAGGGAAAAGCTGACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATGCCATCTTATGCAAACAAGCTGGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGAAGAGCTTTACAAGGTTTCATCAATGTTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTATGGGAGGTCTGTGGTGATTCTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGATGGATCTTGAAGAGAATTCTGGAACAGATGAAAATGACCTTGATTTACTCAGGAAAGCCCTTATTATTGATAGCCAGGAAGACAGCAAACAATGCACCAGCAATTTAAGCATAAAGACAATTGACTCTGAGGAACCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATCGGCGTGGACAGAAGCAGCTAACAAGGTTATTCTTGAAAGAAGCAGAACATGCTTTGCAGTTATCACAGAATGAAGAAGAGGTGACCTCATGTTAA 1683 0.4135 MASPEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFSEKDVSDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDGELKELRGTTLYRATELQKKSLLSLYETKVKDIVKKLLTLDGNSEIEVCFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHDSCIPEADEKSSQVKKSNNLTKEVTCNSYTMTGETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLTLAAQSPLQNDQEISISYGNKGNEELLYLYGFVIDDNTDDYVMVHYPAEAMNTISFSESKGQLLEVQNAEMRCLLPKTFLDNGFFPLGTQISGEDNKGKADQVCNYSWSGQRKMPSYANKLVFPEKFMTTLRTIAMQEEELYKVSSMLEELAGPERERELSDTDVQSAVWEVCGDSGALQLLVDLLRVKMMDLEENSGTDENDLDLLRKALIIDSQEDSKQCTSNLSIKTIDSEEPKLMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSQNEEEVTSC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02504 560 CDD SET_LSMT 32 313 - -
Phco3g02504 560 SUPERFAMILY SET domain 8 317 IPR046341 -
Phco3g02504 560 Pfam SET domain 36 299 IPR001214 GO:0005515
Phco3g02504 560 Gene3D set domain protein methyltransferase, domain 1 5 313 - -
Phco3g02504 560 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 495 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco3g02504 SET 4.3e-10 No_clan