Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02475 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCATTTCATCAGATCCTGGAGGTGATTTCACCACAAAAAGACCTAAGTTTGATCAAGGAACAGAAGAAAAGGTCAATGAGGAAACATATTCTAATGAGAAATGCGTAAAGGATCCGGAGCAGTATGGAGATGCATCGACAGAAAGTGGTCATTCCAATGTTGCTACAGCTAGATCTGAGAAGTCAGGTTATGATCAACTTCCAAAAGAATTAAATGAAATGAAAATTGAAGACGACAAAGGAAAAAACAATGAGAAGGATATGGAAGCAACCATTGTAAATGGCAATGGAACAGAAACAGGCCAAATAATTACAACTGCTATAGGTGGTCGAGATGGACAACCAAAGCGGACAATCTCATACATGGCAGAACGGGTAGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCCAAGTGCATTGAAACTGGCGAAGCAGTTGCCATAAAAAAAGTGTTACAAGACAAGAGATATAAGAATAGGGAACTACAGGTTATGCGTATACTTGACCATGCTAATGTTCTCAGACTAAAGCACTGTTTCTATTCAGCTGCCGAGAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTACCTGAAACGGTCTACAGAGTTTCCAAGCACTATATCAGAATGCACCAACATATGCCTATCATTTATGTGCAACTGTATTTGTACCAGATATGTCGGGGTTTAAATTATTTGCATCACGTGATTGGAGTCTGTCATCGGGACATCAAACCCCAGAATCTATTGGTTAATACCCAGAATCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCCGGCGAACCCAACATATCATACATATGCTCACGGTATTACAGAGCTCCAGAGCTTATATTTGGTGCAACAGAGTACACAACTGCTATTGATATTTGGTCCGCTGGTTGTGTTATGGCTGAGCTTCTTCTAGGACATCCAATGTTTCCTGGAGAGAGTGGGGTTGATCAGTTGGTTGAGATCATTAAGATTCTGGGAACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACCGAATTTAAGTTTCCTCAGATAAAAGCTCACCCTTGGCATAAGGTTTTCCACAAGAAGATGCCAACAGAAGCAGTGGATCTAGTGTCGAGGATGCTTCAGTATTCACCAAATCTACGTTGCACTGCTTTGGAGGCTTGTGCACACCCTTTCTTTGATGATCTGCGAGACGCAAATGCATGCTTGCCAAATGGGCGACCACTGCCTCCATTGTTTGATTTCACGGCACAAGAACTATCCGGCATACCAGAAGAGTTGCGTCGACGTCTCATTCCTAATCATGCAAGAAGTTGA 1398 0.4177 MNMMRRLKSIASGRTSISSDPGGDFTTKRPKFDQGTEEKVNEETYSNEKCVKDPEQYGDASTESGHSNVATARSEKSGYDQLPKELNEMKIEDDKGKNNEKDMEATIVNGNGTETGQIITTAIGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCIETGEAVAIKKVLQDKRYKNRELQVMRILDHANVLRLKHCFYSAAEKDELYLNLVLEYVPETVYRVSKHYIRMHQHMPIIYVQLYLYQICRGLNYLHHVIGVCHRDIKPQNLLVNTQNHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVMAELLLGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPTEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLRDANACLPNGRPLPPLFDFTAQELSGIPEELRRRLIPNHARS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02475 465 CDD STKc_GSK3 131 423 IPR039192 -
Phco3g02475 465 Gene3D Phosphorylase Kinase; domain 1 121 215 - -
Phco3g02475 465 ProSitePatterns Protein kinases ATP-binding region signature. 142 166 IPR017441 GO:0005524
Phco3g02475 465 FunFam Shaggy-related protein kinase kappa 216 464 - -
Phco3g02475 465 MobiDBLite consensus disorder prediction 26 56 - -
Phco3g02475 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Phco3g02475 465 MobiDBLite consensus disorder prediction 9 23 - -
Phco3g02475 465 ProSiteProfiles Protein kinase domain profile. 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02475 465 SMART serkin_6 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02475 465 FunFam Glycogen synthase kinase-3 beta 120 215 - -
Phco3g02475 465 MobiDBLite consensus disorder prediction 60 75 - -
Phco3g02475 465 SUPERFAMILY Protein kinase-like (PK-like) 135 447 IPR011009 -
Phco3g02475 465 Pfam Protein kinase domain 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02475 465 MobiDBLite consensus disorder prediction 1 85 - -
Phco3g02475 465 Gene3D Transferase(Phosphotransferase) domain 1 216 464 - -
Phco3g02475 465 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 100 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02475 Phco-Chr3 51438597 51442790 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phco3g02475 Pkinase 1.9e-65 CL0016