Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02442 ATGAGTGGTGGTGCTGGTAGCAGCACCACTGGTAGCCCTTGTGGAGCTTGTAAGTTCCTCAGAAGAAAATGTATTCCGGGTTGTATCTTTGCTCCGTATTTCGATGCAGAGCAAGGAACAAACCATTTTGCTGCTGTGCACAAGGTTTTTGGGGCTAGCAATGTGTCCAAGCTTCTCCTTAGCATTCCTGTGCACAAGAGGCTTGATGCAGTCATCACCATTTGTTATGAAGCACAATCCCGCCTCAGAGATCCTGTTTACGGCTGTGTTTCGCACATCTTTGCCCTTCAGCAACAGGTGGTGAACTTACAAGCAGAACTCTCATACCTACAAGGCCACCTTGCCCAAATGGAGGTACCTCATCCGCCACCACCTCCTCTAACGCAATCGGTAGTGACACCGCGATTCTCAGTGACCGATCTACCATCGACCACCGCAGCGGCAGCGGCAACCACCACTTATGACCTGTCTTCACTTTTTGATCCAACAGGGCAAGTTTCATGGGCCATGCAACATAGGGCAATGGACCCACGTCAATACGTGGCTCATCTTCCATCAGCTTCTACTAGGGCTGACGTTCAAGCTGTGGCAGGTGACCTTTCTCATAGACATGGCTCTCCTCCATCACCTCCTGCTTCAAGCTCCAATGCTTCACCATCTCTGTCCCTTTCCAAATGA 678 0.5044 MSGGAGSSTTGSPCGACKFLRRKCIPGCIFAPYFDAEQGTNHFAAVHKVFGASNVSKLLLSIPVHKRLDAVITICYEAQSRLRDPVYGCVSHIFALQQQVVNLQAELSYLQGHLAQMEVPHPPPPPLTQSVVTPRFSVTDLPSTTAAAAATTTYDLSSLFDPTGQVSWAMQHRAMDPRQYVAHLPSASTRADVQAVAGDLSHRHGSPPSPPASSSNASPSLSLSK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02442 225 MobiDBLite consensus disorder prediction 207 225 - -
Phco3g02442 225 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Phco3g02442 225 PANTHER LOB DOMAIN CONTAINING PROTEIN 9 128 - -
Phco3g02442 225 MobiDBLite consensus disorder prediction 191 225 - -
Phco3g02442 225 Pfam Lateral organ boundaries (LOB) domain 13 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02442 Phco-Chr3 51019775 51023238 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco3g02442 LOB 1.2e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02442 3 51019775 51023238 Phco3g02442 3 51019775 51023238 ECH
Phco3g02442 3 51019775 51023238 Phco1g00941 1 9563642 9567292 PCT