Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02431 ATGGCTGCTTGTGCTTTGTTCAGTGGTGGCACTAACATTACCGAAGATGGCAATGTTAACAACGGGAGTGGGAGTTCTACTAGTCCTCTGACAAGTGCATCTAACTCTAGCAACATGAGCAACGAGGACCAGCACAACCTACATGGCATCATGCCACAGCCTCATTGTGATAGAAAGATGGTGAGGAAAAGAATGGCTTCTGAGATGGACCAAGTTAACGTTCATGTCACTCCACCACACAACGCTTCCTCCACAAGTGATTATCCTAGGTTTCCTCGTAGAAGCACCACCAGCATGAACATGTCATCCTTAGAAAAAGGGTCCACCACCACAGCTACGTTAGCCGCAGGTACTTGTAGTAATAGCAATAATAATAATAATAACTATCATTTTAATAATAGTAACCATAATAGTAATAGTGGAAGTATTTCGTCAAGAGATAACGTTGCCATTCCAAATTACCCCACTGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCCACCACCATCAATTCCTCTGGTGTTGCTCCAAACTACAGTGCTCACCAACACCATCATTTCCAAGGACTTGTTGAAAGTCAAAGCCAGGACCAGCAAAACCCCGTGCCTGCAGTGTGTGGATTCTCAGGGTTACCACTTTTTCCATCTCAAAGCCAAAGGAACCGAGACAACAACACCGCCACCACCAACGTAAGAAGCAGTGGTGGAAATATTGTTGACGTGGTTGCTTCTTCTTCTCCTTCCATGGATGACACTTCAGCCGCGACAAGTGGTTGGATCGATGGTATATTGAAGGATCTCATTCACAGTTCAAACAGTGTTTCGATTCCCCAGCTAATCAGCAACGTGAGGGAGATTATATACCCTTGCAACCCCAACCTTGCAACGATTCTTGAATACAGGTTGCGTCTTCTCACTGAGTCTACCCCACAAAACAAAAGAGGCACAGAAGGGGTGCCTCTTCCTCCTTCTGTGTCCTCAGTGAAGCTCATGAATAATCGTGTGGATGGCATTGTTCCTAATTTGCACTTCACAGACGCATCAGGTGGTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGCTGTGCCTCCAATCACTCACCACCATGATAACAACGTAAACAACACCAACACCAACAGTAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCGCCACCACCCCCCCATTATTCACCCCCACAAGAGAAGCAGCCTCACCCTCAAGAGGAAGATCTAGCAGCGACCAGCAGTGCTGAGGTGGCACTCACAAGAAAGAAGAAAGAAGAGTTGCGGGAACAGAAGAAGAAAGACGAGGAGGGACTGCATCTCCTCACTTTGCTGCTTCAGTGTGCTGAAGCTGTTTCCGCTGAGAATCTAGAAGACGCCAACAAGATGTTGCTAGAGATTTCCCAATTGTCAACACCGTTTGGCACATCAGCCCAGCGTGTGGCCGCTTATTTCTCGGAAGCTATATCAGCAAGGTTGGTGAGTTCATGTCTGGGGATATATGCCACTTTGCCACACACCCATCAAAGTCACAAGGTAGCATCGGCTTTCCAAGTGTTCAATGGTATCAGTCCTTTCGTGAAGTTCTCACACTTCACAGCAAACCAAGCAATCCAAGAAGCTTTTGAAAGGGAAGAAAGGGTGCACATCATAGATCTGGATATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTCTACATTCTAGCTTCGAGACCTGGTGGAGCCCCTTATGTGAGGCTCACGGGGCTCGGTACTTCCATGGAAGCACTCGAAGCAACGGGTAAACGTTTATCTGATTTTGCAAACAAACTTTGCCTTCCCTTTGAGTTCTTCCCAGTGGCCGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTTAATGTTAGCAAAACCGAAGCTGTTGCAGTTCACTGGTTGCAACATTCCCTCTATGATGTCACCGGCTCAGACACCAACACCTTGTGGCTCTTGCAGAGGCTAGCACCTAAAGTGGTGACTGTGGTAGAGCAGGACCTAAGCAACACTGGTTCATTCTTGGGGAGGTTTGTGGAAGCCATACACTACTACTCGGCGTTGTTTGACTCTCTCGGGTCTAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAGCAGCAGCTATTGTCTAGGGAGATTCGCAATGTGCTAGCTGTTGGGGGGCCATCGAGAACTGGGGAGCCAAAATTTCACAATTGGAGGGAGAAGTTTCAGCAGTGTGGATTTAGAGGTATATCTCTAGCTGGTAATGCTGCCACTCAAGCAAGTCTACTACTTGGCATGTTCCCATCGGAGGGTTATACCTTGGTGGAGGACAATGGCATCCTTAAACTTGGTTGGAAGGATCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCTCCCTTCCATGGTGGCACTGCCATTACCCATCATAACTAG 2460 0.4764 MAACALFSGGTNITEDGNVNNGSGSSTSPLTSASNSSNMSNEDQHNLHGIMPQPHCDRKMVRKRMASEMDQVNVHVTPPHNASSTSDYPRFPRRSTTSMNMSSLEKGSTTTATLAAGTCSNSNNNNNNYHFNNSNHNSNSGSISSRDNVAIPNYPTVTVTTNYSTMLLPSSTTINSSGVAPNYSAHQHHHFQGLVESQSQDQQNPVPAVCGFSGLPLFPSQSQRNRDNNTATTNVRSSGGNIVDVVASSSPSMDDTSAATSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLATILEYRLRLLTESTPQNKRGTEGVPLPPSVSSVKLMNNRVDGIVPNLHFTDASGGAVVVNQHMLSNWAVPPITHHHDNNVNNTNTNSNPSVSLVTLPSPPPPPHYSPPQEKQPHPQEEDLAATSSAEVALTRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFYILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLCLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKFQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHGGTAITHHN 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02431 819 MobiDBLite consensus disorder prediction 1 53 - -
Phco3g02431 819 MobiDBLite consensus disorder prediction 11 47 - -
Phco3g02431 819 MobiDBLite consensus disorder prediction 75 106 - -
Phco3g02431 819 Pfam GRAS domain family 451 806 IPR005202 -
Phco3g02431 819 MobiDBLite consensus disorder prediction 393 409 - -
Phco3g02431 819 ProSiteProfiles GRAS family profile. 441 806 IPR005202 -
Phco3g02431 819 MobiDBLite consensus disorder prediction 374 424 - -
Phco3g02431 819 MobiDBLite consensus disorder prediction 374 392 - -
Phco3g02431 819 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 410 801 IPR005202 -
Phco3g02431 819 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02431 Phco-Chr3 50887006 50890054 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco3g02431 GRAS 2.6e-122 CL0063