Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02429 ATGGGAAACTGCGGAACCAGAGAGGAATCTGCCGTAGTATCCAACGCCCAAGTTCAGCAGCTTCACCATGCGGCGTCCTTGGGCGCCAGTGCGAGGAGTCAGAATGCCGGTAGCGAGAAGAAGCACGGTCACGGTCACAGGCACAATCTGAGTGAGTGCGCTTCGGATCTGAGCGAAGCGTGTTCGACACCGCGCGGTAACAATAGCAACAGCACGCACGTGATATCGTTCACGCTCTACGAGTTGGAGACCATAACGAAGAGCTTCCGCGGAGACTACATCCTCGGCGAGGGAGGGTTCGGCACCGTTTACAAAGGCTACATTGATGAGAACGTCAGAGTGGGACTCAAATCGCTCCCTGTAGCGGTTAAGGTTCTGAACAAGGAAGGATTACAGGGACATCGAGAGTGGCTTACGGAGGTGAATTTTCTAGGGCAGCTAAGGCATCCTAATCTGGTGAAGTTGATTGGGTACTGTTGTGAAGATGATCATAGGCTGCTTGTGTACGAGTTCATGTTCCGTGGGAGTTTGGAAAACCACTTATTCCGAAAGGCAACTGTCCCTTTATCATGGGCTACAAGAATGATGATTGCTTTTGGAGCTGCCAAAGGACTTGCATTTCTCCACAATGCTGAAAGGCCGGTTATCTACCGTGACTTCAAAACGTCTAATATATTGTTGGACTCGGATTATACAGCAAAGCTTTCTGATTTTGGACTAGCTAAAGCAGGACCACAAGGTGACGAAACCCATGTATCCACTCGAGTCATGGGTACATATGGTTATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACGGCTAGGAGTGACGTCTATAGCTTTGGTGTTGTTCTTTTGGAGCTCTTAACGGGAAGGAAATCAGTTGACAAGACCAGACCTGGCAAGGAACAGAGCTTGGTAGATTGGGCAAGGCCAAAGCTAAATGACAAGAGAAAGCTGCTACAAATAATTGATCCTAGATTGGAGAATCAATACTCAGTGAGGGCTGCACAAAAAGCATGTAGCTTGGCTTATTACTGTTTAAGCCAAAACCCCAAAGCGAGGCCCCTAATGAGCGATGTAGTTGAGACATTGGAACCCTTACAAAGTTCCAGTGTTGGTGCAGGTGAAGTCTCATTATCTGGATCAAATAGTGTGAGTGCTGGGCCTTTTGCGATGAACAAAATCTCTGACTACCGTATGCGCCAAAGGTTTTCAAACAATGTTGGTCCTGGTGCTACCTGTCGATCTCCAAACCCAAATTGTTCACCAGGTGCCCCAGCAGCACTACGGGTGAGATGA 1305 0.4851 MGNCGTREESAVVSNAQVQQLHHAASLGASARSQNAGSEKKHGHGHRHNLSECASDLSEACSTPRGNNSNSTHVISFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGAGEVSLSGSNSVSAGPFAMNKISDYRMRQRFSNNVGPGATCRSPNPNCSPGAPAALRVR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02429 434 PANTHER OS01G0588500 PROTEIN-RELATED 49 370 - -
Phco3g02429 434 FunFam Probable serine/threonine-protein kinase PBL8 172 384 - -
Phco3g02429 434 SUPERFAMILY Protein kinase-like (PK-like) 68 367 IPR011009 -
Phco3g02429 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Phco3g02429 434 FunFam Serine/threonine-protein kinase BIK1 57 171 - -
Phco3g02429 434 Gene3D Phosphorylase Kinase; domain 1 53 171 - -
Phco3g02429 434 ProSiteProfiles Protein kinase domain profile. 89 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02429 434 MobiDBLite consensus disorder prediction 411 434 - -
Phco3g02429 434 ProSitePatterns Protein kinases ATP-binding region signature. 95 124 IPR017441 GO:0005524
Phco3g02429 434 MobiDBLite consensus disorder prediction 23 49 - -
Phco3g02429 434 Gene3D Transferase(Phosphotransferase) domain 1 172 379 - -
Phco3g02429 434 Pfam Protein tyrosine and serine/threonine kinase 94 366 IPR001245 GO:0004672|GO:0006468
Phco3g02429 434 CDD STKc_IRAK 95 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02429 Phco-Chr3 50845690 50848746 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco3g02429 PK_Tyr_Ser-Thr 5.4e-48 CL0016