Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02428 ATGACAGTGTTGTGGAAGATGAAGAGAAGCATGGCCTGGAATCCCTTCAAGCTCATCTTCCTTTGTATTACCTTCTTCATTTTCGCAACTCGTCAAGCAAAGGGCGCTGATGATCTTTACCGATTTTGCAGTGAAGAAGACAGAAGCAGTGACAACAGCTCCTATCAGACGATCCTGAGGACCCTCCTCTCTTCCTTATCTTTCAACGCTACAGCCAACGCTAATGGATTCTACAACAATACAATCCTTGCCACAAACTCCTCTGACACAGTATATGGTCTTTTCATGTGCAGGGGTGATCTTCTCCCTCACGCCTGCAAAGATTGCGTGGCAAACGCAACCCAGACTCTATCTTCAGACACAAACTGTTCCCTGTCCAAATCGGGTCTGATTTGGTACAACGAGTGCATGGTTCGGTATTCCAACCTCTCTTTCTTCTCCACTGTGGACAGAACTCCCGCATTGTATTCTTGGAACGTGGCCAACATCTCCTCCAACTTATCAAGCTTCAATAGTTTGTTGGACAACACCATGAATGAAACTACACATGAAGCAGCCAATTCCAGTAAGAGGTATTCCGCAAAGCAAGGAAACTTATCTGGAATTCAGACCCTTTACTGTCTAACTCAGTGCACACAAGACCTTTCACCTCAACAATGCTCAGACTGTCTTGTTGAAGCAATATCAAGAATTCGGACTTGCTGTGATGGAAAACAAGGAGGAAGAGTTTTGTTTCCCAGTTGTAACATTAGGTATGAACTGTACCCTTTCTACCGCGTCACCGATGATGCACCACAAGGACTTGTCCCAGAAACAACATATGCACACACAGATTCTGAATATTCAGAAGATCCCGGCTATATTTCTCACAACTGCTCAAACAACAACTCTGACGCTGCTTTCCGATCAAACCTCGGAACCCTCTTCTCTGGCTTGTCTTCCAACGCCACTTCTAACTATGGATTCCAGACGCATGAGGGAACAGCGTATGGCCTCTTCAGGTGCCGTATCGACATTCCTTCTCGCCTCTGTCAACTATGCATCCAAAACTCAACTGACAAAATAACCTCCGAGTGTGGTTTGGCTTCTACGGAGGCCATAATATGGTACAACCACTGCTGGCTTCGCTATTCCGACAGAAACTTCTTCTCCAGCACCGAAACAAGTCCGAGATTTGTGAATCTGAACTTCAGCAACAGCAATCCGATACAGTCCTCTGTTGCTTCTGAGTTATCGAACCAGTTAGCTAAGGTGGCGACCATGACTGGGAATACTGATAACAAATTCCAAACAGATGATTCTCTGAGATTGAATGATAAGCAAACAGTGTTTATTCTTGGTCAATGCTCATCGGATCTATCAAGCAATAGTTGCATTGGGTGCCTAAATGATGTGATTGGAACAGCAATTCCATGGAGCAGTTTGGGAAGCTTAGGTGGACGAGTTCTGTTTCCTAGCTGCATTCTTCGCTTTGAACTGTTCCAGTTTTACAATCTCACGCCTACCACACCAACTGCTCCTCCTCCCCCACCAGGAGAAAGTCAGCGAAGAACAATTATCTTGATCGTTACATCGAGCATACTTGCATCAGGGATACTTTTCACCTTTTGTTATTATTTAATACGAAAAAACATCAGAAAACATAGTAGAGCTATTCTTCAAGAAAATTTTGGGCAAGAAAGTTCCACTATAGAGTCATTACAATTCAATCTGCCAATAATTGAAGCAGCAACAAGTAATTTCTCCCAGAAGAACAAAATCGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGCATCCTTTTTGATGGACGATCTATTGCTGTAAAGAGACTCTCAAAAAATTCCAAACAAGGCATAGAAGAGTTCAAAAATGAGGTTCTATTAATAGCTAAACTTCAACATAGGAATCTAGTGGCATTCATAGGATTTTGTCTTGATGAACAAGAAAAAATACTTATTTATGAATATGTGCCAAACAAGAGTCTAGACTACTTCTTATTCGATACTAAACAAGAAAAAGTTTTGAGTTGGATTGAGCGTCACAAAATCATAGGCGGAATTGCTCGAGGAATTCTATATTTACATGAACATTCTCGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATGTACTACTAGATGAAAATATGAACCCGAAAATTTCAGATTTTGGACTTGCTAGAATTATTGAAATAGATCAAGAGGAGGAAAGTACAAATAGAATTATCGGAACATATGGCTATATGTCTCCGGAGTATGCTATGTTTGGACAATTTTCTGAGAAATCTGATGTTTATAGTTTTGGTGTTATGATTCTCGAGATTATTAGTGGAAAAAAGAATATGAACTCACATGAATCACATCATGTTGCTGATGGACTTCTAAATTTTGTTTGGAGAAATTGGAGGGATGAAACAACACTCAACGCTTTGGACCCAAAATTAAAAGAAAATTATTCTAATGTTGAGGTCATGAGATACATTCAAATTGGTCTATTATGTGTTCAAGAAAATCTAGATGCCAGACCCACAATGGCAACAATTGTTTCATATCTTAGCAGTCACACAATTGAGTTGCCATTTCCACAAGAACCTTCTTTTTTCTTAAATCATAGAACAAATCCAATTGTTGCACATGAATCAAGTTCAGGTCAAGATGCCAACACTTCCATACCATCTTCTACTAATGACATATCTATAAGTGAATTTTATCCTCGATAG 2724 0.4027 MTVLWKMKRSMAWNPFKLIFLCITFFIFATRQAKGADDLYRFCSEEDRSSDNSSYQTILRTLLSSLSFNATANANGFYNNTILATNSSDTVYGLFMCRGDLLPHACKDCVANATQTLSSDTNCSLSKSGLIWYNECMVRYSNLSFFSTVDRTPALYSWNVANISSNLSSFNSLLDNTMNETTHEAANSSKRYSAKQGNLSGIQTLYCLTQCTQDLSPQQCSDCLVEAISRIRTCCDGKQGGRVLFPSCNIRYELYPFYRVTDDAPQGLVPETTYAHTDSEYSEDPGYISHNCSNNNSDAAFRSNLGTLFSGLSSNATSNYGFQTHEGTAYGLFRCRIDIPSRLCQLCIQNSTDKITSECGLASTEAIIWYNHCWLRYSDRNFFSSTETSPRFVNLNFSNSNPIQSSVASELSNQLAKVATMTGNTDNKFQTDDSLRLNDKQTVFILGQCSSDLSSNSCIGCLNDVIGTAIPWSSLGSLGGRVLFPSCILRFELFQFYNLTPTTPTAPPPPPGESQRRTIILIVTSSILASGILFTFCYYLIRKNIRKHSRAILQENFGQESSTIESLQFNLPIIEAATSNFSQKNKIGKGGFGEVYKGILFDGRSIAVKRLSKNSKQGIEEFKNEVLLIAKLQHRNLVAFIGFCLDEQEKILIYEYVPNKSLDYFLFDTKQEKVLSWIERHKIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIIEIDQEEESTNRIIGTYGYMSPEYAMFGQFSEKSDVYSFGVMILEIISGKKNMNSHESHHVADGLLNFVWRNWRDETTLNALDPKLKENYSNVEVMRYIQIGLLCVQENLDARPTMATIVSYLSSHTIELPFPQEPSFFLNHRTNPIVAHESSSGQDANTSIPSSTNDISISEFYPR 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02428 907 Gene3D Phosphorylase Kinase; domain 1 542 656 - -
Phco3g02428 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Phco3g02428 907 Gene3D - 36 145 IPR038408 -
Phco3g02428 907 Gene3D - 391 496 IPR038408 -
Phco3g02428 907 Gene3D - 152 257 IPR038408 -
Phco3g02428 907 Gene3D - 285 382 IPR038408 -
Phco3g02428 907 CDD STKc_IRAK 587 853 - -
Phco3g02428 907 FunFam Cysteine-rich receptor-like protein kinase 25 153 257 - -
Phco3g02428 907 ProSiteProfiles Gnk2-homologous domain profile. 388 496 IPR002902 -
Phco3g02428 907 Pfam Salt stress response/antifungal 410 492 IPR002902 -
Phco3g02428 907 Pfam Salt stress response/antifungal 292 379 IPR002902 -
Phco3g02428 907 Pfam Salt stress response/antifungal 43 142 IPR002902 -
Phco3g02428 907 Pfam Salt stress response/antifungal 164 255 IPR002902 -
Phco3g02428 907 ProSiteProfiles Gnk2-homologous domain profile. 151 257 IPR002902 -
Phco3g02428 907 Pfam Protein tyrosine and serine/threonine kinase 583 853 IPR001245 GO:0004672|GO:0006468
Phco3g02428 907 Gene3D Transferase(Phosphotransferase) domain 1 657 860 - -
Phco3g02428 907 ProSiteProfiles Gnk2-homologous domain profile. 37 145 IPR002902 -
Phco3g02428 907 ProSiteProfiles Gnk2-homologous domain profile. 283 382 IPR002902 -
Phco3g02428 907 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Phco3g02428 907 MobiDBLite consensus disorder prediction 880 907 - -
Phco3g02428 907 FunFam cysteine-rich receptor-like protein kinase 10 657 860 - -
Phco3g02428 907 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 165 903 - -
Phco3g02428 907 SMART serkin_6 581 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02428 907 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 542 656 - -
Phco3g02428 907 ProSiteProfiles Protein kinase domain profile. 581 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02428 907 SUPERFAMILY Protein kinase-like (PK-like) 564 884 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02428 Phco-Chr3 50834150 50838476 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco3g02428 PK_Tyr_Ser-Thr 1.4e-48 CL0016