Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02400 ATGCTAACCCTCAATTACAATGCTATTTCTTCTTCGTTCTCAACTGTTCCATTTCATGCCAATTATGCACTCTCTACTCAAACTCAATTTTTATTTTCTTCCAATCTTAATTACTCCTTTGCTACAACAGCAACCAGAAAGCTCAAGTCTTTTCAGCTCAAGGCTGGATTTTGGGAATCAATTAAATCTGGGTTGATGAAGAATAACTCAATGCAAGTCGTTGATCCACCCTCTATAGATGAAGAAGATGAAGAACCTCTGCCTCAAGAGTTTGTCCTTGTGGAAAAGACCGAACCTGATGGAACAATTGAGCAAATAGTATTCTCTTCAGGTGGAGATATTGATGTTTATGATCTTCAAGCCCTCTGTGACAAGGTAGGGTGGCCACGTAGACCACTGTCAAAATTAGCTGCGGCTTTGAAAAATAGCTACATAGTGGCCTCACTTCATTCTATAAGAAAGTCTCCTGGGTCAGAGGGGGATGAACAGAAGAGATTAATTGGCATGGCCCGTGCTACGTCTGACCATGCCTTCAATGCCACAGTTTGGGATGTTCTAGTTGATCCTGGTTACCAGGGCCAAGGTCTTGGTAAAGCTCTTATAGAGAAACTGATTAGAGCTCTTCTGCAAAGGGACATTGGCAATATAACTCTGTTTGCAGATAGTCAAGTTGTGGAATTTTATCGCAATTTAGGCTTTGAAGCTGACCCTGAGGGCATAAAAGGCATGTTTTGGTACCCGAATCACTAA 750 0.416 MLTLNYNAISSSFSTVPFHANYALSTQTQFLFSSNLNYSFATTATRKLKSFQLKAGFWESIKSGLMKNNSMQVVDPPSIDEEDEEPLPQEFVLVEKTEPDGTIEQIVFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSIRKSPGSEGDEQKRLIGMARATSDHAFNATVWDVLVDPGYQGQGLGKALIEKLIRALLQRDIGNITLFADSQVVEFYRNLGFEADPEGIKGMFWYPNH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02400 249 PANTHER ACYL-COA N-ACYLTRANSFERASE 10 246 IPR045039 GO:0008080
Phco3g02400 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 115 238 IPR016181 -
Phco3g02400 249 FunFam Putative acetyltransferase NSI 110 246 - -
Phco3g02400 249 Gene3D - 110 246 - -
Phco3g02400 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 249 IPR000182 GO:0016747
Phco3g02400 249 Pfam Acetyltransferase (GNAT) family 116 233 IPR000182 GO:0016747
Phco3g02400 249 CDD NAT_SF 161 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02400 Phco-Chr3 50562395 50565513 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco3g02400 Acetyltransf_1 5.1e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02400 3 50562395 50565513 Phco3g02400 3 50562395 50565513 ECH