Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02365 ATGCCACGCGTACTCAGCGCGTGGAAAGACAAACTTGTTGATGTCAGCTTTTCTAATCTGCTTTCTTTGACTGGACAAGGGGTTTTCGTCGACGAATCAAAACGCAGAAAGTTCCGATTTTTACCCATTTCGCTGGCCCTGGATCGCTTCACCCTAAGTTGTATGAGCTGCCATTTCTCGCAAAGATCAGATGGACTTTCCTTATGTTACTGGAATTGCCCACCAATTGCTGGAATCATAGGACTTTCAGTTCTTCTGTGTTCTCAATGGTGTGGATCTCTAAGGAACTGGGAGCCAAACAGAAACTGTGAAGCTCTGGATGAAGGCATAAAGAGTTGTCTACAACAACGAAGTTCTGTAAAAAGGATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCCGATTACATATGTTAAACGTGTAAGCCATAATGAGCATGTGCCTACAGTACTGCCTGAACCTCAAACTCGTACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAAAGTCAATAACAACAGAACAAGAACATTATCTGCTCCATCAACTCTTGATGCCGCAGAACAAGATGCTTTGGCCTCAATTGAGTATGAGGAACAAGAAGAGTCTAAACACCGAGCTGGATCAATGAAGGAGCAGCGTTCATCTAGTCCACAACCCTTACCACTCCCATCCCCACAGGGAGGTGCTGTATTGAAGGCTATTGGCAGCTTTAAGTCAGTGACAGCTAGTGGTCCTCTATCTGCTTCTGGGCCTTTGCCACTCCCACCTACTGGCTCACTTCGGAATTTTCTGTATGATGAAATTGCCGCTGCTTGCCACAATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCGTCCACCATATATAAGGCTTCCTTTGGTGATGATGTTTCAAGTTCGAAAAAGTTTGAAGCCACTGTCACACGACTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAGTGAAGTTAATACTCTTGCATCCTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCTCGAGAGGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTATTGTATGGGAGATCTGATGGGCCATCAATAGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACTTTCTTGCATGAAGAAGGGCCGTTTCAGGCAATGTATAATGAATTCTCAACAGCTAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGCAACCTATCGATGGAGACCCTGGAGAAAGGAATGCTCACCCCAAAGAGCAACGTATGGAGCTTTGGAATATTTCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGTCACCCAAAGGAAGAAAGGAATCTAGTGAAGTGGAGCCGGCCCTTCCTAGCTGACAACTACCGTCTGTCGTTGATCATGGATCCTCAACTCAAGGGTCGTTTTCCTTCTAAAGCAGCAACAACAATATCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAGAGACCTACCATGAGAACTGTAGTTGAGCACCTGAAGATGATACAGGATTTAAAATACTCATGCCGGTTCCCTCTGCAAGAGCCAGCATCAAACTCTGGAAAACATATGTCAAGATCACCTAGTCTGAATGGCATAATCTGCCCAGTACCAAGGTTGAATTTCTCACCATCACCACCATCTGGAGTTCCACCACTACCTGTTTCACCTCCAAGATGGTCTGGTGGAGTGCCCCTTCTCCCACCTCGTGCATGTTCTTCCAGTTTCTCTTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 2010 0.4453 MPRVLSAWKDKLVDVSFSNLLSLTGQGVFVDESKRRKFRFLPISLALDRFTLSCMSCHFSQRSDGLSLCYWNCPPIAGIIGLSVLLCSQWCGSLRNWEPNRNCEALDEGIKSCLQQRSSVKRMGCFTVLKSKKKKSDPITYVKRVSHNEHVPTVLPEPQTRTRSLQSAPPSFRTRVKPIQPINKVNNNRTRTLSAPSTLDAAEQDALASIEYEEQEESKHRAGSMKEQRSSSPQPLPLPSPQGGAVLKAIGSFKSVTASGPLSASGPLPLPPTGSLRNFLYDEIAAACHNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFISEVNTLASLQHPNLCKLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAATTISDIAQRCLQKEPSERPTMRTVVEHLKMIQDLKYSCRFPLQEPASNSGKHMSRSPSLNGIICPVPRLNFSPSPPSGVPPLPVSPPRWSGGVPLLPPRACSSSFSLEELDRQESRKSSSSASRRASVEGF 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02365 669 MobiDBLite consensus disorder prediction 613 669 - -
Phco3g02365 669 MobiDBLite consensus disorder prediction 212 244 - -
Phco3g02365 669 Gene3D Phosphorylase Kinase; domain 1 272 372 - -
Phco3g02365 669 ProSiteProfiles Protein kinase domain profile. 291 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02365 669 PANTHER OS01G0588500 PROTEIN-RELATED 219 570 - -
Phco3g02365 669 MobiDBLite consensus disorder prediction 613 631 - -
Phco3g02365 669 MobiDBLite consensus disorder prediction 180 199 - -
Phco3g02365 669 Pfam Protein tyrosine and serine/threonine kinase 305 566 IPR001245 GO:0004672|GO:0006468
Phco3g02365 669 MobiDBLite consensus disorder prediction 212 226 - -
Phco3g02365 669 SUPERFAMILY Protein kinase-like (PK-like) 269 576 IPR011009 -
Phco3g02365 669 MobiDBLite consensus disorder prediction 153 173 - -
Phco3g02365 669 MobiDBLite consensus disorder prediction 150 200 - -
Phco3g02365 669 Gene3D Transferase(Phosphotransferase) domain 1 374 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02365 Phco-Chr3 50256407 50262843 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Phco3g02365 PK_Tyr_Ser-Thr 8e-26 CL0016