Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02354 ATGGAATTGCCTGATACAGTCAATATAGACGTTTACAAGGGAAGATTCTGCACGAGTGGTGGAGTTAAGTCTCAGCTTGGATATGTTGAAACTGATCCATCCGGTCGATATGGCCGTTTCAGGGATGTTCTTGGAAAAGGAGCAATGAAGACTGTGTATAGGGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTAGGTGATGTTTTTCACTCACCAGAACAACTTCAGCGCCTTTATTCAGAGGTTCATCTCCTGAAGCACCTCAACCATGATTCTATGATGATATTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCGTCACTGAATTGTTCACCTCCGGTACACTTAGAGAGTATAGACAGAAGTATAAGCGAGTAGATATCCGAGCAGTTAAGATTTGGGCTCGCCAGATTCTTGGTGGTTTGGAGTATTTACACAGCCATAATCCTCCAGTAATCCATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGACTTAGGCCTAGCAGCTATACTTCGTAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGGTAGACATATATTCCTTCGGTATGTGCATGATAGAGTTGCTTACTTTTGAGTTCCCATACAGTGAATGCGCCAACCCAGCTCAAATATACAAGAAGGTTACTTCGGGGAAGCTACCTAATGCGTTTTACAGAATCCCAGATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGTCAAATGTCTCGGATAGACCATCAGCAAAGAAGCTCTTGTTGGACCCTTTTTTAGCGGTGGAGCAACTTGAAATACCATTGCCACCAAACACACCATTACTTCCAAATCACACTCTAAAGCTTAATTCGATTCCACTTCTTCCCATTGACCATCATCGTGATCAAACAAAGTCTGCAGAAATGACAATTACTGGTTCAATAAACGAAGAGGACAACACTGTTTTCCTCAAAGTGAGGATATCTGACAGAACAGGGCATACGAGACATGTGTTCTTCCCATTTGATACATTAAAAGACACGGCTATTCAGGTGGCGATGGAAATGGTGCAAGAACTTGAGATTAGCCACTTGGAACCATTGGAGATTGCTGCAATGATTGATTATGAGGTATCAGCTTTAGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAGCACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAACCACCACCCCTTCTTCTTATCATCTTCTCCATCATCTCCTCGTGGTTCTGGCCACATGTCTGCTTCCAACTCTTTCAAAACCCATGTTCGTGGCAACCATTACCCTTTTGCTCTAGAAGGGCCTCAAGATGACATGTGCATGAACAACGACGACGCAAGCTCTCAAGCCTCGATGAACTCCTTCAAGTATTCAACCTTCCAATTCTGCGACCCGGGCCACGAAGACGAGCACGACGGAACCGAACGCCACAAGTGGACCACATTGTCGTACTGTGGCGGCGGCAAAGAAGGCGAACCCGGTTTGGCCAACCCGGTTTTGAACCCGCCACGGATGGATTGTTCGTGCGGGTGCAGGGTTGGGTCGGGTCACGGGTGCCCGAGGCTGACTCGGATCCGCTCGTGCCCGCACGAGCGGCGGAGCCAGCAGCTCCAACGGTCGATGATGTTGGAGGAGATTTACAAGTACAACAGACGCTTCTTCAACACCGTTGGTACCGTTGAGAACATCGGATTTCGGCATCCACTAAGAGGTGGTGTGTGTTTTCCTCGTGTGTAG 1872 0.4658 MELPDTVNIDVYKGRFCTSGGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNRTFNFVTELFTSGTLREYRQKYKRVDIRAVKIWARQILGGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIELLTFEFPYSECANPAQIYKKVTSGKLPNAFYRIPDLEAQKFVGKCLSNVSDRPSAKKLLLDPFLAVEQLEIPLPPNTPLLPNHTLKLNSIPLLPIDHHRDQTKSAEMTITGSINEEDNTVFLKVRISDRTGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDYEVSALVPTWRDRVKCHHQRQHSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHMSASNSFKTHVRGNHYPFALEGPQDDMCMNNDDASSQASMNSFKYSTFQFCDPGHEDEHDGTERHKWTTLSYCGGGKEGEPGLANPVLNPPRMDCSCGCRVGSGHGCPRLTRIRSCPHERRSQQLQRSMMLEEIYKYNRRFFNTVGTVENIGFRHPLRGGVCFPRV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02354 623 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Phco3g02354 623 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Phco3g02354 623 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Phco3g02354 623 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02354 623 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02354 623 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
Phco3g02354 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Phco3g02354 623 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02354 623 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 25 524 - -
Phco3g02354 623 CDD STKc_WNK 36 296 - -
Phco3g02354 623 FunFam probable serine/threonine-protein kinase WNK9 121 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02354 Phco-Chr3 50157629 50160668 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phco3g02354 Pkinase 5.9e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02354 3 50157629 50160668 Phco3g02354 3 50157629 50160668 ECH