Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02352 ATGGGTAACTACAGGTTCAAACTATCAGATATGATCCCAAACGCCTGGTTTTACAAACTCAAGGACATGGGAAAAGCAAGAAAGCAAACTCCCACTCAGTCCAAGAAGAAAAAACAACCTTCACCATCCTCTACCACACAACCTTCAAAACCAAAGCAACCCCACCAATTCAATACCAGAAAGTCTTACTACTTCACAAGGGAGCTTAACCCAAATGATAGAATCTACACCTCACCAGCAAATAACCAAAATGCCAAATACAATAATTCCCCTGAAGCCCCCAGAAAATCATCCAAACAAAGACTCAGGAGAAGAACTGCAAGGACTTCTTCACCTAAGCTTGCTGTTGCCGCTAACAATGACAACTCCTCGTCACCACATGATAGCTCTGTTGAATCAGAGTACCCTGACCCAGAATTCAGAACAGACCGTGTTCTCGCCACTGAAGCATTAGATGAAACGGTTTCTTGGTCCAACTCTTTTGCCTGCAAGGTACACTCCAACGCCAAGGACATCATCATTGATGTAGACAACAATTCCACAGAAAGAAAAGACGATAAGCTAGAAGGGTATGAATATGATTCCTTGTCAGACCTCGTGCTTCCACCAATTGTGACCAAGCCTGCGAAATTCGACGACTTGCTGAGTGATGCCAAGAAGAAAGAAACCAAAACCAAAAGCAAAATGGATGCACAAGAAGAACCAAACCTGAAGGGGCCTCTAAGAGTTAAAATTGTGAAGGAAGGCGCTGCACCAATGAAGGAACATAAGAACACCCCTGGTAGGAGATTCTCTGTGAGTTCTTCTCCAGGAGTGAAGCTTCGGATGAACTCGCCGCGAATTGCCACCCGGAAAGCTCAGGCACATGGCCGGAGTAATGTGTCGTCCGCCGCTGGCTCCGGCTCCCGGAGAAGCCTCTTGGATAGCTTTGCGATTGTGAAGTCATCACTGAATCCACAGAGGGACTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAACAACATAAGGACATCAAAGGATTTAGAGGATCTTCTTGCTTGCTATCTTTCTCTTAATTCAGATGAGTATCATGACCTCATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATTAG 1128 0.4433 MGNYRFKLSDMIPNAWFYKLKDMGKARKQTPTQSKKKKQPSPSSTTQPSKPKQPHQFNTRKSYYFTRELNPNDRIYTSPANNQNAKYNNSPEAPRKSSKQRLRRRTARTSSPKLAVAANNDNSSSPHDSSVESEYPDPEFRTDRVLATEALDETVSWSNSFACKVHSNAKDIIIDVDNNSTERKDDKLEGYEYDSLSDLVLPPIVTKPAKFDDLLSDAKKKETKTKSKMDAQEEPNLKGPLRVKIVKEGAAPMKEHKNTPGRRFSVSSSPGVKLRMNSPRIATRKAQAHGRSNVSSAAGSGSRRSLLDSFAIVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02352 375 NCBIfam uncharacterized plant-specific domain TIGR01568 311 373 IPR006458 -
Phco3g02352 375 ProSiteProfiles OVATE domain profile. 312 371 IPR006458 -
Phco3g02352 375 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 373 IPR038933 GO:0045892
Phco3g02352 375 MobiDBLite consensus disorder prediction 24 139 - -
Phco3g02352 375 Pfam Transcriptional repressor, ovate 316 372 IPR006458 -
Phco3g02352 375 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Phco3g02352 375 MobiDBLite consensus disorder prediction 35 95 - -
Phco3g02352 375 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02352 Phco-Chr3 50128234 50129361 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco3g02352 Ovate 2.4e-24 No_clan