Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02266 ATGATGCAGCAAGAGGATATGCAATCCCCATGTTCATTCTTTGAAGACATGAACTCAACTTTTGAATCAGGTGTTGAGTCCTGTGCCTTCACTATGTATGATCATAGTGAGTCCTCTGCCTTCACTATGTTTGAATCAGGTGTTGAGTCCTGTGACTTCACTATGTATGATCATGTTGGTGATTGTGTACCCTATGGCTTCAGTCTGGATGACCATGTTGCTGACTGTGGACTCAATACACTGTTGAGCAGTCTAGAGGATTCCACCTCTGAAATTTGTTCCTTACCCTTTTCTTCCTCCCCCTTATTTTTCTCCAATGATCATATTCATATCCAATACCCAATCAATGAAGAAACTGTGCAACTTCCATCACTCATGGAATTGGATGATTTTGATTCCATCCTGGATACTGAAATTGTTAGTTTTCAAGGTCATGGATACCTAAGAGAGAGTGAAGGGAGCTTCTCCCCTTCACAGAATTTGTCGAGTGAGGTGGAAAATGCTTGGAGTCCTACCCCATCTGTGAGATCAGAGTTGTCCACAAATCAAACTTCACCATTGAATTTACCTCACGAAAACAAGGAGATTGAAAACCAAGTGAGTCTTCCACACTTGCTGGAGGCATATGGAGAGGCCTTGGAGCAAGGACAAAAATCACTAGCAGAAGTGATTTTGAGGAGCATGAGCCAGAAAGCTAGTCCACTAGGTGAGTCTCTAGAACGCCTTGTATTCTACTTGTCTCAAGGCATGACCAATCATGGAGACTATCTCAAAGGGGAGGCCTTCAAGAACTTTGAGCCTGCTTCGAGGACACTCTATCAAGGTCTCCCAATTGGGAAAATTGCTGACTTTGCAGCTGTTTCTGCAATTCTTGAAGCCATGCCACAAGATTGTACCGGTCTACACTTAGTGGACTGTTGTATTGGAAATGGGGTTCGATGGGCTTCAATGATTGAGGCTATTGCACACATGAACAAAACATTGAAATTGACATCAATCAAATGGGATGGTGAGGGTCTTGAATGTGGTTCTAGTTCATCAAGTTTTGAGGAAACTAAAAGGCAGCTGTATGAGCATGCCGAATCCTGTGGTTTGAAGTTGAAGGTAGAGGAGAAAGGAGTGAAGGAACTTGTTGCTGAGATTAAGAAAATGGACAAAAGGGGTGGGAGGGGTGAGTTTTTGGCCTTCAATTCCATGATTGATCTTCCACATATGGGAAGAGTAAGAACCAGAAGACAAGCCCTGGAGTTTCTAGAGGTGGCTGAGGATTTGATCAACACCTCTGGCAGTGGGGGAATTATAACTTTTGGGGATGGAGGTGCTTATGAGAAAGTGAAAAACAACTTGAATTTCAGGTCATTCTTTACAGCACATTTATTGCACTACCAAGCCTTGTTACAATCAATTGAATCACATTTCCCAAGTCGTTTCTCAGAAGCAAGAATTGCCATGGAGCAATTGTTTTTGCAACCTTGTATTTCCTCTCTTGATTGGTTACAAGCATGGGAGGAGATGCACAGGGGTGACCCTGTTGGGGCTGAGATCAGCTTGAAGGGTTGCCAATTGAGCAAAAATATTTTGATGGAAATCAGAGAAGTGTTGAGAGGAAGTGAAGGCTCATATGAAACTAGGATTGAAGGACAAAATGGCAATGAACTAGTTTTGGAGTACAAAGGAATTCAACTACTAAGATTTTCAACTTGGAAAAACTAA 1713 0.4232 MMQQEDMQSPCSFFEDMNSTFESGVESCAFTMYDHSESSAFTMFESGVESCDFTMYDHVGDCVPYGFSLDDHVADCGLNTLLSSLEDSTSEICSLPFSSSPLFFSNDHIHIQYPINEETVQLPSLMELDDFDSILDTEIVSFQGHGYLRESEGSFSPSQNLSSEVENAWSPTPSVRSELSTNQTSPLNLPHENKEIENQVSLPHLLEAYGEALEQGQKSLAEVILRSMSQKASPLGESLERLVFYLSQGMTNHGDYLKGEAFKNFEPASRTLYQGLPIGKIADFAAVSAILEAMPQDCTGLHLVDCCIGNGVRWASMIEAIAHMNKTLKLTSIKWDGEGLECGSSSSSFEETKRQLYEHAESCGLKLKVEEKGVKELVAEIKKMDKRGGRGEFLAFNSMIDLPHMGRVRTRRQALEFLEVAEDLINTSGSGGIITFGDGGAYEKVKNNLNFRSFFTAHLLHYQALLQSIESHFPSRFSEARIAMEQLFLQPCISSLDWLQAWEEMHRGDPVGAEISLKGCQLSKNILMEIREVLRGSEGSYETRIEGQNGNELVLEYKGIQLLRFSTWKN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02266 570 MobiDBLite consensus disorder prediction 151 189 - -
Phco3g02266 570 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 173 542 IPR005202 -
Phco3g02266 570 ProSiteProfiles GRAS family profile. 193 569 IPR005202 -
Phco3g02266 570 Coils Coil 367 387 - -
Phco3g02266 570 MobiDBLite consensus disorder prediction 152 189 - -
Phco3g02266 570 Pfam GRAS domain family 204 569 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02266 Phco-Chr3 49136261 49137973 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco3g02266 GRAS 9.9e-31 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02266 3 49136261 49137973 Phco3g02266 3 49136261 49137973 ECH