Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02265 ATGGCTTCTCAAACTCTTCTGGTCCTTCTCTTATCTCTCTCTTCCTTACACCAAATTGCCTCCTTCGTGATCTTTGAAGGATTTGATGAAAACAGTGAAATAAGCCTTGAAGGATCTTCCATCATCAAAACCAGCCGTTTACTTAAACTCACCAACAGTTCAACCAATATTGTAGGCCGTGCATTCTACAAAACACCCTTCCCAATGCTTAACGAAACAGACCCTCCTCTTCAACCCTATGCTTATTCCTTCAGCACCAACTTTGTTTTCTCAATTGTATCCCCTAATTCTGGTTCTGGGGGCTTTGGCCTTGCCTTCACCATAGCACCATCAACACAGTTTCCTGGGGCTGAGGCTGGCCACTATCTTGGTCTTTTTAACGGCACCAATGAGGGGGAGGCCTCAAATCACATCTTTGCAGTTGAGTTTGACACTGTAAATGGTCACAAAGGTGACTCAGACTCTGAAGGAAACCATGTTGGGGTGAATATAAATGGCATGGACTCAAAGATTACTGAACCAGCTGCATACATTGAAGAGGGTACTGTTAGTGTAAAGGAGGATTTTAGAATGGCCAAGGTTGATGCTGTCCAAGCTTGGATAGAGTATGATGGTGAAAAGAGAACTCTGAATGTAACAATAGCTCCTTGGGAATTATCAAGGCCCAGCACACCACTTATCAATAATTATAACCTTGACCTTTCCAACGTTATGAAGGAAAACATGTTTGTTGGTTTCTCAGCATCAACAGGCCATGAAACAAGCTCTCATTATCTTCTAGGGTGGAGTTTTGCAGTGAACGGTGTTGCCCCTTCACTGAATTCTTCTAATCTTCCAAATCCACCACCCAAGGAGGAAGATCCATCTTCATTTCCTTGGGTCCAGGTTGCAGTTGGGATCTTGTCTGCTTTGACTTTGAGCCTTTTGTGTGTTCTAATTCTTCTGACATGTTGTAAGAGATACATGGATTTTGAGGTTCTTGAGGACTGGGAGATGGATTGTCCTCACAGGTTTAGATACAAAGATCTTAAGCTTGCCACACAAGGGTTCAAAGAGAGCCAACTAATTGGAGTTGGAGGCTTTGGTGCTGTCTACAAAGGAGTCTTACCAACTACAGGAACTGAAGTAGCTGTTAAGAGGATTGTGAGGAGCCCTTTCCATGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTGGGAAGGTTGAGGCACAAGAATTTGGTGAACCTTCAAGGATGGTGCAAGAAAAAGAATGACCTCCTCCTAGTCTATGATTTCATTCCAAATGGAAGCCTTGATTTTGTCCTATATAACCCCAATAACAACTTTGTTTTGGACTGGGGGCAAAGATTCAACATTCTCAAAGGCATCAGTGCTGGACTATTGTACTTGCATGAAGAGTGGGAGCAAGTGGTGATCCATAGAGACGTGAAAACTAGCAATATTTTGATAGATGGGAACTTGAGTGCACGTTTAGGTGACTTTGGACTTGCAAGGCTCTATAACCATGGTCAAGTATCACACACAACCAATGTGGTTGGCACCATTGGCTACATTGCACCAGAGCTAACTCGCACAGGAAAGGCTTCTACAAGAACTGATGTGTATGCATTAGGGGTTGTGCTCCTTGAAGTGGTCACAGGTAAGAGGCCTCTTGATTCAGATCAGTTTTTCTTGGTGGAATGGGCGATTGAGAACTACCACTTGGGTCAAATTCTTGAGGTGGTTGATCCTAAGCTGGATTCAGTTTATGACGAGGAAGAAGTTGAGCTGGTTCTCAAGTTGGGTTTACTATGCACTCAACATAGACCAGATTATAGACCTACCATGAAACAAGTTACAAGGTACCTAAACTTTGATGACCCTCTTCCTGATATTGCTGATTGGGGATATTTTGGTTCTAATAGCAGCAGCAGAATGAACTCAGGTTTCTTAGAAGTCACGTCATCTTTGAGAACTGTTGAAACATCAGGCTATTTGTCCTCCATTAGCATGAGTACCAAGTCCATGGATGCTGGTAGATAG 2025 0.4311 MASQTLLVLLLSLSSLHQIASFVIFEGFDENSEISLEGSSIIKTSRLLKLTNSSTNIVGRAFYKTPFPMLNETDPPLQPYAYSFSTNFVFSIVSPNSGSGGFGLAFTIAPSTQFPGAEAGHYLGLFNGTNEGEASNHIFAVEFDTVNGHKGDSDSEGNHVGVNINGMDSKITEPAAYIEEGTVSVKEDFRMAKVDAVQAWIEYDGEKRTLNVTIAPWELSRPSTPLINNYNLDLSNVMKENMFVGFSASTGHETSSHYLLGWSFAVNGVAPSLNSSNLPNPPPKEEDPSSFPWVQVAVGILSALTLSLLCVLILLTCCKRYMDFEVLEDWEMDCPHRFRYKDLKLATQGFKESQLIGVGGFGAVYKGVLPTTGTEVAVKRIVRSPFHGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDFIPNGSLDFVLYNPNNNFVLDWGQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDGNLSARLGDFGLARLYNHGQVSHTTNVVGTIGYIAPELTRTGKASTRTDVYALGVVLLEVVTGKRPLDSDQFFLVEWAIENYHLGQILEVVDPKLDSVYDEEEVELVLKLGLLCTQHRPDYRPTMKQVTRYLNFDDPLPDIADWGYFGSNSSSRMNSGFLEVTSSLRTVETSGYLSSISMSTKSMDAGR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02265 674 FunFam L-type lectin-domain containing receptor kinase S.4 427 629 - -
Phco3g02265 674 Gene3D - 20 277 - -
Phco3g02265 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Phco3g02265 674 FunFam L-type lectin-domain containing receptor kinase V.9 20 269 - -
Phco3g02265 674 CDD STKc_IRAK 356 618 - -
Phco3g02265 674 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Phco3g02265 674 Pfam Protein kinase domain 350 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02265 674 FunFam Lectin-domain containing receptor kinase VI.3 335 426 - -
Phco3g02265 674 SUPERFAMILY Protein kinase-like (PK-like) 333 621 IPR011009 -
Phco3g02265 674 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Phco3g02265 674 Pfam Legume lectin domain 24 279 IPR001220 GO:0030246
Phco3g02265 674 SMART serkin_6 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02265 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 283 IPR013320 -
Phco3g02265 674 Gene3D Transferase(Phosphotransferase) domain 1 427 626 - -
Phco3g02265 674 PANTHER - 18 619 - -
Phco3g02265 674 CDD lectin_legume_LecRK_Arcelin_ConA 21 268 IPR001220 GO:0030246
Phco3g02265 674 ProSiteProfiles Protein kinase domain profile. 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02265 Phco-Chr3 49112089 49114113 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco3g02265 Pkinase 7.8e-49 CL0016