Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02231 ATGGATTCACACGTTCCTTCCAACCTTGCAATACTACTACCTCTAATAGACTATCAACGCTTTGGTCACCTTTCTCTGTGTGAGACTAAAAACCTTACATTTTCAACCTCTTTACGCCTCCATCAGTTGAAAAATTCTGGGTCTAACAGTGAGTCAAACCATGCTGTGAAGGCTTCCCCCCCTGCAGTGTATTCAAGTTTCCAACTTGCTTCAATGTTTTCCAAGCTTAGGAGAGACTGGAGCTGGGGCATAGTCATGTTTTGTAATTGGTTTGGTGCTTTGAATTGTTTTGGAAGGAGGGATGATCCTGCAAACCAGCCACATGAACAAGTGGTTGCAACTCAAAAGTTTAGCTATAATTCATTGAGATCAGCAACAAAAGATTTTCATCCATCAAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGGGATGGTACTCAGGTTGCTATCAAGTCTCTTTCTGTTGAGTCTAAACAAGGAACTCATGAATTTATGACAGAAATTGATATAATATCAAATATACGACATCCAAATCTTGTGGAACTAATTGGCTGTTGTATTGAGGGTAGTCATCGAATACTGGTTTATGAGTTTATGGAGAACAATAGCCTTGCAAGCTCTTTGCTTGGTTCAAAAAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATTTGTCGTGGCACAGCTTCTGGTCTGTGTTTTCTTCACGAAGAGGCTCAACCAAACATTGTTCACAGGGACATCAAGGCCAGTAACATATTGTTGGATGGGAACTTTAATCCAAAAATTGGGGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACCCATGTTAGTACTCGAGTTGCAGGAACTGTGGGATATCTTGCACCAGAATATGCACTTCTGGGGCAACTTACAAAGAAGGCAGACGTTTATAGTTTTGGGATTCTCATGCTTGAAATAATAAGTGGGAAAAGTAGTAGCAAAGCTGCATTTGAAGAGGACTATTTGGTTTTGGTGGAATGGGCTTGGAAGCTGAAGGAAGGAAATAGGCTTCTAGACCTTGTTGATTCAGAACTAAGTGAGTATGACGAGAGTGAGGTGTATCAGTTCCTTGTGGTGGCTCTATTTTGCACCCAATCAGCTGCTCAGCATAGACCAAGCATGAAACAAGTATTGGAAATGCTTTCCAAGGAAGTTCATCTTAATGAGAAGGCATTGACTGAGCCTGGAATATACAGATGGCACAGCACTGGAAAAAGGGGTGGCTCTTTGAATGAGACATCATCTCAGGCAATCAAGTACAGAAAAACTGAAAATCCACATGAAGCAGCTTCAACCCACTATAGTGGTACAGATATTGTGACAGATATGCTTCCAAGATGA 1395 0.4122 MDSHVPSNLAILLPLIDYQRFGHLSLCETKNLTFSTSLRLHQLKNSGSNSESNHAVKASPPAVYSSFQLASMFSKLRRDWSWGIVMFCNWFGALNCFGRRDDPANQPHEQVVATQKFSYNSLRSATKDFHPSSKIGGGGYGVVHKGVLRDGTQVAIKSLSVESKQGTHEFMTEIDIISNIRHPNLVELIGCCIEGSHRILVYEFMENNSLASSLLGSKSKYVALDWPKRAAICRGTASGLCFLHEEAQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSKAAFEEDYLVLVEWAWKLKEGNRLLDLVDSELSEYDESEVYQFLVVALFCTQSAAQHRPSMKQVLEMLSKEVHLNEKALTEPGIYRWHSTGKRGGSLNETSSQAIKYRKTENPHEAASTHYSGTDIVTDMLPR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02231 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Phco3g02231 464 ProSiteProfiles Protein kinase domain profile. 129 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02231 464 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Phco3g02231 464 Gene3D Transferase(Phosphotransferase) domain 1 205 413 - -
Phco3g02231 464 SMART serkin_6 129 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g02231 464 Pfam Protein tyrosine and serine/threonine kinase 132 399 IPR001245 GO:0004672|GO:0006468
Phco3g02231 464 FunFam cold-responsive protein kinase 1 100 204 - -
Phco3g02231 464 CDD STKc_IRAK 135 401 - -
Phco3g02231 464 SUPERFAMILY Protein kinase-like (PK-like) 107 399 IPR011009 -
Phco3g02231 464 FunFam Putative LRR receptor-like serine/threonine-protein kinase 205 411 - -
Phco3g02231 464 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 54 432 - -
Phco3g02231 464 Gene3D Phosphorylase Kinase; domain 1 99 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02231 Phco-Chr3 48663120 48669081 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco3g02231 PK_Tyr_Ser-Thr 5.4e-46 CL0016