Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02209 ATGGGTTCCTCTCGCTCACGTGGTTCTGCCACTGCCAAAGAACGCCTACGTTGGACACAAGAACTCCATGATCGCTTTGTGGTGGCTGTAAATAGACTAGGGGGCCCTGATAGGGCAACACCAAAAGGTATATTAAAAGGAATGAAGGCTTTGGGTAATTCTCAGCTAAACATTTATCATGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAGTCCCCCACAAGAGGAAAAGTTGAGAAGAGAAGCATATCAGATATACTTCCAGATTTTAGTTCTATATCTGCTCATCAACTAAAGGAACTCCTTCAAATACAGACAGAGATGCAAAATCGCTTGAGTGATAAAATAGAGGCTCAGAGAAGTTTGAAGGTAAAAGTTGAAGCACAAGGAAGGTTCTTGGAGAGACTTGGACAAAGTAGTCATAGCAAAACAATAATTGGAAAAGCATGCAAGCCTTTTGCTTCTTCTACAACTGCACCTCTGCCTTCTCTTTCTGAGGAATCCCAATTATTGAAATCACAAACTGAGAAAGAGCATGAATCAGTCAAAAAGCAAAGGATTTCAGAAGAGGGTGTTTTTCCAACAAGTTTTGAACATGCATCATCCATCCCACCAGAATTCTTCAACCAAACATGGAATCTTCCTTGGAGTCAGCTTGCAGCAGCATGCCAGTCAACTTTGGATCCCAGTTTCTTATTTTGA 717 0.4128 MGSSRSRGSATAKERLRWTQELHDRFVVAVNRLGGPDRATPKGILKGMKALGNSQLNIYHVKSHLQKYRISKLIPESPTRGKVEKRSISDILPDFSSISAHQLKELLQIQTEMQNRLSDKIEAQRSLKVKVEAQGRFLERLGQSSHSKTIIGKACKPFASSTTAPLPSLSEESQLLKSQTEKEHESVKKQRISEEGVFPTSFEHASSIPPEFFNQTWNLPWSQLAAACQSTLDPSFLF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02209 238 MobiDBLite consensus disorder prediction 176 190 - -
Phco3g02209 238 Gene3D - 12 73 - -
Phco3g02209 238 SUPERFAMILY Homeodomain-like 12 70 IPR009057 -
Phco3g02209 238 MobiDBLite consensus disorder prediction 162 190 - -
Phco3g02209 238 NCBIfam myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Phco3g02209 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 189 IPR044848 GO:0003700
Phco3g02209 238 Pfam MYB-CC type transfactor, LHEQLE motif 102 141 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02209 Phco-Chr3 48348493 48352086 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco3g02209 Myb_CC_LHEQLE 1e-10 No_clan