Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02203 ATGGAGGGTCATCATCTCCATCACCATCACCATCACCGGCCGCAGCAGCAGCAACATCAACAGCAACAGCAACATCAGCATCAGCATCACCACCCTCACAACATCACAACCAGCGCTAACGTGGATGCCACGGATAGGTTCCCCCAATGGAGCATCCAGGAGACAAAAGAGTTCCTCGTGATCCGTGCGGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAGCTTTGGGAAGTCATCTCCAACCGGATGAAGGAAAAGGGTTTCCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGGTGTGAAGCGATAGAGCCAGAGGCGACGAGGCAGCAATTCCCGTTTTACAATGAGCTTCAAGGGATTTTCACATCAAGGATGCAGAGAATGTTGTGGGCAGAAGCAGAAGGAGGGTCGAAGAAGAAGGGGGTGCACCTTTCATCGGAGGATGAGGAAGAGGGAAATGAAGAGAGTGAGGGAGATCAGAAGGGTAGCATGATGAAAAAGAAGAAGAAGGGGAAGATGGTAATTGGAGGTGGTAGCAGTAGCAATATGGAGAGTTTGAAGGAGATCATGGAGGAGTTCATGAGGCAACAGATGCAGATGGAGGCACAGTGGATGGAGGCGTTTGAGGCAAGGGAGAATGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCATTGGAGAATGAGAGGATGATGATGGACCAGAGATGGAGAGAGAGGGAAGATCAAAGAAGGATTAGGGAAGAAGTTAGGGCTGACAAGAGAGATGCTCTAATCACAGCTCTTCTCAACAAGCTCAGAAGAGAAGAGATGTAG 864 0.4954 MEGHHLHHHHHHRPQQQQHQQQQQHQHQHHHPHNITTSANVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGFHRSAEQCKCKWKNLVTRYKGCEAIEPEATRQQFPFYNELQGIFTSRMQRMLWAEAEGGSKKKGVHLSSEDEEEGNEESEGDQKGSMMKKKKKGKMVIGGGSSSNMESLKEIMEEFMRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMDQRWREREDQRRIREEVRADKRDALITALLNKLRREEM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02203 287 CDD GT1 48 113 - -
Phco3g02203 287 Gene3D - 50 111 - -
Phco3g02203 287 MobiDBLite consensus disorder prediction 1 36 - -
Phco3g02203 287 Coils Coil 196 216 - -
Phco3g02203 287 MobiDBLite consensus disorder prediction 1 16 - -
Phco3g02203 287 MobiDBLite consensus disorder prediction 149 194 - -
Phco3g02203 287 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Phco3g02203 287 FunFam Zinc finger and SCAN domain-containing 20 50 111 - -
Phco3g02203 287 Pfam Myb/SANT-like DNA-binding domain 49 131 IPR044822 -
Phco3g02203 287 PANTHER FI21293P1 10 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02203 Phco-Chr3 48276592 48277915 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco3g02203 Myb_DNA-bind_4 1.6e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02203 3 48276592 48277915 Phco3g02203 3 48276592 48277915 ECH