Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02063 ATGTCTTGTTATTTCCCCTTCACTTGCCAAAGAAAGATGGAGTTCAACACCCAAAACTATAAGAAATCTGAGATAAGGTGGAGCTCAGATGATCAAGGTGGTCCTGGACAAGTGAAATCTTATTCTTGTTCCTTTTGCAAGAGAGGATTCTCTAATGCACAGGCCCTAGGTGGCCACATGAATATCCACAGAAGAGATAGGGCCAAGCTCAAGCAATCTTCTGAAGAAAGCTTGCTTTCGTTGGACATCTCAATCAAGACCACAAGTGATCACAATAATAATGGCCCTTCTGATTTGGAAGAGAAAATTTTGTTTCGGTTGGGTTCTGGAGAAGACCAGAAGCATGCTAGAAATTGTAAAATGCCATTCAATTTCCCTCACAAAAATGATCATGATTATGCACCAGAAAGGGGCTTGTTGATTGGTACAGCAGAAATTCCTCATCTTCCTTCTTTTGTTTTGGGGCAGCGAATTGAAGAGAAGAAAGCTGACTTAGACCTTGAACTTAGGTTAGGCCTTCATCCCCAGGAGTCAGCAACATTGAACACTAGATCCTTCTTTTGA 564 0.4149 MSCYFPFTCQRKMEFNTQNYKKSEIRWSSDDQGGPGQVKSYSCSFCKRGFSNAQALGGHMNIHRRDRAKLKQSSEESLLSLDISIKTTSDHNNNGPSDLEEKILFRLGSGEDQKHARNCKMPFNFPHKNDHDYAPERGLLIGTAEIPHLPSFVLGQRIEEKKADLDLELRLGLHPQESATLNTRSFF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02063 187 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Phco3g02063 187 Gene3D Classic Zinc Finger 12 96 - -
Phco3g02063 187 SUPERFAMILY beta-beta-alpha zinc fingers 39 67 IPR036236 -
Phco3g02063 187 PANTHER OS07G0101800 PROTEIN 21 175 - -
Phco3g02063 187 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02063 Phco-Chr3 46260179 46260742 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco3g02063 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02063 3 46260179 46260742 Phco3g02063 3 46260179 46260742 ECH