Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02015 ATGTCCCCAGCAGGTTCTTCAAGATGGAGCCCTACCACAGAACAACTCATGATCTTAGAGGAACTCTACAGGAGTGGCATTAGAACTCCTAGTGCCTCTCAAATTCAGCAAATAACGACACACCTTTCTTTCTATGGCAGGATAGAAGGAAAGAATGTGTTCTACTGGTTTCAGAATCACAAGGCTAGGGATAGACAGAAGCTCAGAAGGAAACTCAGCAAGCAACTGCAGCTACAGCAACAACAACTCCAAGTCCATCATTGCCAACTCAATCCAGATATCCCTAACCATTATGTTGGCACCTTTGGTTATACTCCTTGTTCTTCAACCCAGGATTTTCCCTTTTATAACCCACCTACCTTTCTTTATCAGGGAGGATCTGCAAACACATCTGAACAGGCATTCAATTACGCATGGAATGTGCACAACCTGCAAAGTAATCTGGTGGAGAAGGAAGAGGTGACCTTCAACAACAATGGTTGGAGTACACCTGTGGATGTTAACAACCAAGAATCTTCATGTTGCACTTCTCGACCTCTCAAGACCCTTGATCTCTTTCCACTCACAACCACCAGAACCAGTGAAGACTGCACCACTCCACCCAAGTAG 609 0.4483 MSPAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLSKQLQLQQQQLQVHHCQLNPDIPNHYVGTFGYTPCSSTQDFPFYNPPTFLYQGGSANTSEQAFNYAWNVHNLQSNLVEKEEVTFNNNGWSTPVDVNNQESSCCTSRPLKTLDLFPLTTTRTSEDCTTPPK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02015 202 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Phco3g02015 202 FunFam WUSCHEL-related homeobox 4 6 73 - -
Phco3g02015 202 CDD homeodomain 8 67 IPR001356 GO:0003677
Phco3g02015 202 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Phco3g02015 202 Gene3D - 3 67 - -
Phco3g02015 202 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Phco3g02015 202 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 195 IPR044555 GO:0003700|GO:0099402
Phco3g02015 202 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02015 Phco-Chr3 45487270 45488324 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco3g02015 Homeodomain 6.4e-18 CL0123