Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01983 ATGGCCTTTCTCCAGTCTTTCTCTCTCTACATTTCCATGTCCTTGTTCTTCTTCCTCTTCTTTTGCTTCTGCAAAGCCAGTACTACCACCACAAAGTCATTGTCCCCTTCACCCTCCACTTCCTCTGATGTTGAACTTCTCTTGGGAAAAATCAAAGCTTCACTGCAAGGTAACTCTGACAACCTTGTTTTGTCTTCATGGAACTCCTCTATCCCACTTTGTCAGTGGAGAGGCCTCAAGTGGGTGTTCTCCAATGGCACTCCTCTTTCATGCACTGACTTGTCCTCTCCACAATGGACCAACCTTACACTCCACAAGGACCCTTCTCTTCACTTGCTTTCTCTTCAGCTCCCATCAGCAAATCTCTCTGGTTTCCTCCCGAGAGAGCTTGGGGGGTTCCCTATGCTTCAAAGTCTCTACCTTAACATAAATTCATTGCAGGGAACCATCCCTCTTGAGCTTGGCTACAGCTCCTCCCTCTCTGACATTGATTTGGGTGACAATATGCTAAGTGGGGTTCTTCCTCCATCCATTTGGAACTTGTGTGACAGGCTTGTTTCCCTTAGGCTCCGTGGTAATTCACTATCTGGGTCTGTTTCTGAGCCTGCATTGCCCAACTCATCCTGCAAGAATTTGCAGTTGCTTGATTTAGGTGGCAATAAGTTTTCTGGGAGTTTCCCTGAGTTCATAACAAAGTTTGGTGGGCTAAAGCAGCTTGACTTGGGGAACAACTTGTTTATGGGTATAATTCCTCAAAGCCTAGCTGGGCTGAGGCTTGAAAAATTGAATCTTTCCCACAATAACTTTAGTGGGGTTTTGCCTGTCTTTGGAGAATCCAAGTTTGGTGTGGATGCTTTTGAGGGGAATAGCCCTGGTTTGTGTGGACCGCCTTTGGCAAGCTGTGCTAGCACCTCTACACTGAGTTCTGGTGCAGTTGCTGGCATTGTTATTAGTCTGATGACAGGAGCTGTGGTTTTAGCCTCATTGCTGATTGGGTATATGCAGAACAAGAAGAGGAAGGGGAGTGGAGAGAGTGAAGATGAGTTGAATGAAGAAGAGGAAGATGAAGAGAATGGTGGTAATGCTATTTGTGGAGCAGGTGAAGGGAAGCTTATGTTGTTCCCTGGAGGTGAGAATTTGACATTGGAGGATGTGTTGAATGCGACTGGGCAAGTGTTGGAGAAGACTTGTTATGGGACAGCTTATAAGGCTAAGCTTGCTGATGGAGGCACCATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAAAGATAGGGCTTCGTGTTTGTCTGTTATAAAGCAATTGGGAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATCTATGACTATCTGCCTCTCAGAACCCTTCATGATATTTTACATGAACCTAAAGCTGGAAAACCAGTTCTGAACTGGGCAAGACGACACAAGATTGCGTTAGGCATAGCAAGAGGTCTAGCCTATCTTCACACAGGACTAGAAGTTCCTATCACTCATGCAAATGTAAGGTCCAAGAATGTGCTTGTGGATGACTTCTTTGCAGCCAGGCTAACTGATTTTGGCCTGGACAAGCTGATGATTCCATCCATAGCAGACGAAATGGTGGCGCAGGCCAAGAGTGATGGCTACAAGGCCCCTGAGCTTCAAAGAATGAAGAAATGCAACTCCAGGACTGATGTCTATGCTTTTGGCATACTACTGCTTGAAATATTGATTGGGAAAAAGCCTGGAAAGAATGGAAGAAGTGGAGAGTATGTGGACTTGCCCTCAATGGTGAAGGTGGCAGTTTTGGAGGAGACTACAATGGAAGTGTTTGATGTGGAACTGTTGAAAGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAGGCACTGAAGCTGGCAATGGGGTGCTGTGCACCTGTGGCATCTGTGAGGCCAAGCATGGAAGAAGTTGTGAGGCAGTTAGAGGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACCAGAAGTGGAAGTGTTACACCATTTTGA 2064 0.4598 MAFLQSFSLYISMSLFFFLFFCFCKASTTTTKSLSPSPSTSSDVELLLGKIKASLQGNSDNLVLSSWNSSIPLCQWRGLKWVFSNGTPLSCTDLSSPQWTNLTLHKDPSLHLLSLQLPSANLSGFLPRELGGFPMLQSLYLNINSLQGTIPLELGYSSSLSDIDLGDNMLSGVLPPSIWNLCDRLVSLRLRGNSLSGSVSEPALPNSSCKNLQLLDLGGNKFSGSFPEFITKFGGLKQLDLGNNLFMGIIPQSLAGLRLEKLNLSHNNFSGVLPVFGESKFGVDAFEGNSPGLCGPPLASCASTSTLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKRKGSGESEDELNEEEEDEENGGNAICGAGEGKLMLFPGGENLTLEDVLNATGQVLEKTCYGTAYKAKLADGGTIALRLLREGSCKDRASCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDILHEPKAGKPVLNWARRHKIALGIARGLAYLHTGLEVPITHANVRSKNVLVDDFFAARLTDFGLDKLMIPSIADEMVAQAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01983 687 SUPERFAMILY Protein kinase-like (PK-like) 391 663 IPR011009 -
Phco3g01983 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 666 IPR046959 -
Phco3g01983 687 Pfam Leucine rich repeat 211 269 IPR001611 GO:0005515
Phco3g01983 687 Gene3D Phosphorylase Kinase; domain 1 375 463 - -
Phco3g01983 687 Pfam Protein tyrosine and serine/threonine kinase 391 662 IPR001245 GO:0004672|GO:0006468
Phco3g01983 687 Gene3D Ribonuclease Inhibitor 207 305 IPR032675 -
Phco3g01983 687 FunFam Leucine-rich repeat receptor-like protein kinase 209 301 - -
Phco3g01983 687 MobiDBLite consensus disorder prediction 663 687 - -
Phco3g01983 687 SUPERFAMILY L domain-like 77 275 - -
Phco3g01983 687 ProSiteProfiles Protein kinase domain profile. 387 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01983 687 MobiDBLite consensus disorder prediction 339 361 - -
Phco3g01983 687 MobiDBLite consensus disorder prediction 668 687 - -
Phco3g01983 687 Gene3D Transferase(Phosphotransferase) domain 1 465 679 - -
Phco3g01983 687 Pfam Leucine rich repeat N-terminal domain 48 78 IPR013210 -
Phco3g01983 687 Gene3D Ribonuclease Inhibitor 42 206 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01983 Phco-Chr3 44914728 44917586 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco3g01983 PK_Tyr_Ser-Thr 5.2e-26 CL0016