Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01925 ATGGATTACACCAAGTGCACAAACTTGTTCACCCTTTTGATCATACCTTGGTTTCTTTTTGCAGAGGTTGTTACTGCCACAGACACCATCAACACATCTCAGTTCATCAAGGACAATGAAACTATAACCTCCACTGATGGCAACTTCACCTTGGGCTTCTTCACCCCTCAAAATTCTACAAACCGTTATGTGGGAATTTGGTGGCAACCCAAATTCACAGTCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAGTTGTTTCCATTTCTGAAGGTGGCAATCTTGTGGTGTTGAATGGTCAGAATCAAGTAATTTGGTCAACAAATGTGTCCAATGTTGGATCCAACTCTACTTCCAAACTCTTAGATTCTGGGAACCTTGTGCTACAGGACAGCTCATCGGGCAGAACTATATGGGAGAGTTTCCAGCATCCTTCAAATGTACTGTTACCCAATATGAAGATTTCAACTAACAAAGCAACCGGTGAAAAGGTAAAACAAACATCATGGAAAAGCCCTTCTGATCCATCCACTGGTAGCTTTTCTCTAAGTGTTGAAAGCCTTGGTGTACCTGAAGTTTTCATCTGGAAAGAAACTCGCCCATTCTGGCGCACTGGTCCATGGAATGGTAAGGCCTTTACTGGGTTGCCCTACATGAAAAAGTTTTATATTGAAGGGATACATGTTGGAGATGATGGGGAAGGAAATGTTGAATTCCTTTTCAGTGGAGTAGAAGAGATTGGTTTTATAATCTATATACTGAATTCAACGGGCAATTGTGAAGAGAGATGGTGGAATGGAGAGAAGAAAGAATGGGTAGTCTCATGGAATAGTCATCAATTTGAATGTGATGTTTATGGTGTATGTGGACCTTTTGCAGTTTGTAATTCTCAAAGCTCACCAACATGCAGCTGTTTGAAAGGGTTTGAGCCAAGAAACAAAGAGGAATGGAATAGACAAAACTGGACTAGCGGATGTTTTAGGAGAACACCTCTGAAGTGTGAAAGAACCAGCAACCAAAACAAAAGTGCAGATTATACAGAAGATGGATTTTTGGAACTGAAGATGGTCAAAGTTCCAGATTTTTCAGATGGGTCAGCCCTCAGACTTCAACCGGACATGTGCAGAAGCCGATGTTTGGAGAATTGTTCATGCATTGCATACTCATATGATGCTGATATTGGTTGTATGTCCTGGACTGAGAATCTAATGGACATACAAAAATTCTCAAACGGAGGACTTGATCTACATGTTCGAGTAGCCTACACAGAGCTTGATAAAGAGAGAAACAGGACAATCATCACTATTGTTACCGAGACAATAGGAGCTACCTTAATTGTCATTTGTGCATATATCATGTGGAGAAGGATTTCTACCCGCCTAGGTGCAGCATCTGCAGAATATATGAATGACTATGTATTTGGTGATCTGTCACAAGTCAAAGTCCAGGAGCTATTAACATTTAATTTAGAAAAGCTTGTAACCGCCACAAACGAATTTCACCCATCGAACAAACTAGGTCAGGGTGGTTTTGGTCCGGTATACAAGGGGCAATTGCACGATGGCAGGGAAATTGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTCCTTGGCTGTTGTATTGAAGGGGAGCAAAAGATGTTGATTTATGAGTACATGCCAAATAAAAGTTTGGACACATATATCTTTGATCCGTCAAAAGATAAAATTCTTCATTGGAAAAAACGCTTTAGCATAATAGAAGGAGTTGCTCGAGGAATGCTTTATCTTCATAGAGATTCCAGGCTAAAAATCATCCACAGGGACTTGAAGGCAAGTAATATCTTGCTAGATGCAGAGCTAAATCCAAAAATATCTGACTTTGGCATGGCTAGAATCTTTGGTGGGAATGAGGATGAAGCAAATACTAATAGAATTGTTGGAACTTATGGCTATATGTCTCCTGAGTATGCAATTCAAGGATTGCTCTCTGAAAAATCAGATGTCTTTAGTTTTGGGGTTTTGCTACTTGAGATTGTTAGTGGAAGACGAAATTCAAGCTTTTATGAAGAAAATTGTCTTACCCTTTTAGGATTTGCCTGGATACAGTGGCAAGAAGACAACATTCCCTCTCTAATAGATCCAGGAATATATGATCCGAACCTTCACAAAGATATTTAG 2241 0.4003 MDYTKCTNLFTLLIIPWFLFAEVVTATDTINTSQFIKDNETITSTDGNFTLGFFTPQNSTNRYVGIWWQPKFTVIWVANRNQPLNDSSGVVSISEGGNLVVLNGQNQVIWSTNVSNVGSNSTSKLLDSGNLVLQDSSSGRTIWESFQHPSNVLLPNMKISTNKATGEKVKQTSWKSPSDPSTGSFSLSVESLGVPEVFIWKETRPFWRTGPWNGKAFTGLPYMKKFYIEGIHVGDDGEGNVEFLFSGVEEIGFIIYILNSTGNCEERWWNGEKKEWVVSWNSHQFECDVYGVCGPFAVCNSQSSPTCSCLKGFEPRNKEEWNRQNWTSGCFRRTPLKCERTSNQNKSADYTEDGFLELKMVKVPDFSDGSALRLQPDMCRSRCLENCSCIAYSYDADIGCMSWTENLMDIQKFSNGGLDLHVRVAYTELDKERNRTIITIVTETIGATLIVICAYIMWRRISTRLGAASAEYMNDYVFGDLSQVKVQELLTFNLEKLVTATNEFHPSNKLGQGGFGPVYKGQLHDGREIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEQKMLIYEYMPNKSLDTYIFDPSKDKILHWKKRFSIIEGVARGMLYLHRDSRLKIIHRDLKASNILLDAELNPKISDFGMARIFGGNEDEANTNRIVGTYGYMSPEYAIQGLLSEKSDVFSFGVLLLEIVSGRRNSSFYEENCLTLLGFAWIQWQEDNIPSLIDPGIYDPNLHKDI 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01925 746 Pfam Protein tyrosine and serine/threonine kinase 507 703 IPR001245 GO:0004672|GO:0006468
Phco3g01925 746 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Phco3g01925 746 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 579 - -
Phco3g01925 746 SMART blect_4 33 149 IPR001480 -
Phco3g01925 746 ProSiteProfiles Protein kinase domain profile. 504 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01925 746 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Phco3g01925 746 Pfam PAN-like domain 351 410 IPR003609 -
Phco3g01925 746 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Phco3g01925 746 SMART serkin_6 504 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01925 746 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 710 - -
Phco3g01925 746 Gene3D - 21 147 IPR036426 -
Phco3g01925 746 Gene3D Transferase(Phosphotransferase) domain 1 580 745 - -
Phco3g01925 746 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Phco3g01925 746 SMART ntp_6 350 424 IPR003609 -
Phco3g01925 746 PIRSF SRK 2 744 IPR024171 GO:0004674
Phco3g01925 746 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 746 - -
Phco3g01925 746 Gene3D Phosphorylase Kinase; domain 1 469 579 - -
Phco3g01925 746 MobiDBLite consensus disorder prediction 164 184 - -
Phco3g01925 746 SUPERFAMILY Protein kinase-like (PK-like) 487 741 IPR011009 -
Phco3g01925 746 CDD B_lectin 33 149 IPR001480 -
Phco3g01925 746 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Phco3g01925 746 CDD PAN_AP_plant 334 425 - -
Phco3g01925 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Phco3g01925 746 Pfam D-mannose binding lectin 73 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01925 Phco-Chr3 43801301 43804267 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco3g01925 PK_Tyr_Ser-Thr 2.6e-47 CL0016